RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 MRPL38Q96DV4 380 aaKnown RBP3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 C14orf79Q96F83 325 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 NICN1Q9BSH3 213 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 WRAP53Q9BUR4 548 aaKnown RBP3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 TM2D1Q9BX74 207 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 HSD3B7Q9H2F3 369 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 NINJ2Q9NZG7 142 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 SPASTQ9UBP0 616 aa3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 ZNF490Q9ULM2 529 aaPredicted RBP3.5□□□□□ -1.85
NCKAP1-208ENST00000495619 DHRS7CA6NNS2 312 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 E9PLD3 99 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 IMPA2O14732 288 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 TBL1XO60907 577 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 MDKP21741 143 aaPredicted RBP3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 PTBP1P26599 531 aaKnown RBP eCLIP3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 PTPN6P29350 595 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 PRDX6P30041 224 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 RFC2P35250 354 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 MRPS6P82932 125 aaKnown RBP3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 ZNF45Q02386 682 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 OC90Q02509 493 aaPredicted RBP3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 ZNF658BQ4V348 819 aaPredicted RBP3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 SPATA46Q5T0L3 261 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 IGFL2Q6UWQ7 119 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 TRPM8Q7Z2W7 1104 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 NET1Q7Z628 596 aaPredicted RBP3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 MKXQ8IYA7 352 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 SLC25A36Q96CQ1 311 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 TRIM44Q96DX7 344 aaPredicted RBP3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 SMIM14Q96QK8 99 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 MYCBPQ99417 103 aaPredicted RBP3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 NANOGQ9H9S0 305 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 GHRLQ9UBU3 117 aa3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 ISY1Q9ULR0 285 aaKnown RBP3.49□□□□□ -1.85
NCKAP1-208ENST00000495619 FBLL1A6NHQ2 334 aaKnown RBP3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 H3BTX0 84 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 LYPLA1O75608 230 aaPredicted RBP3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 RALAP11233 206 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 ZNF32P17041 273 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 HOXD10P28358 340 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 RPL4P36578 427 aaKnown RBP3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 RPS6P62753 249 aaKnown RBP3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 GNB2P62879 340 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 GABPB1Q06547 395 aaPredicted RBP3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 KCNJ11Q14654 390 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 OR2B11Q5JQS5 317 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 EOGTQ5NDL2 527 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 SULT1C3Q6IMI6 304 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 IGFL3Q6UXB1 125 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 FRA10AC1Q70Z53 315 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 ZSCAN30Q86W11 494 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 CCDC36Q8IYA8 594 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 ENTHD1Q8IYW4 607 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 ARFGAP2Q8N6H7 521 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 LINC01555Q8NAE3 123 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 BBS1Q8NFJ9 593 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 OR10H4Q8NGA5 316 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 RSPH1Q8WYR4 309 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 FGGYQ96C11 551 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 SAMD8Q96LT4 415 aa3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 PIN4Q9Y237 131 aaKnown RBP3.48□□□□□ -1.85
NCKAP1-208ENST00000495619 BBOX1O75936 387 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 ZNF17P17021 662 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 GAP43P17677 238 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 PRDX2P32119 198 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 CDH5P33151 784 aaPredicted RBP3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 TIMM10P62072 90 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 ZP4Q12836 540 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 DPYSQ14117 519 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 ELAVL3Q14576 367 aaKnown RBP3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 IL17AQ16552 155 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 CCDC14Q49A88 953 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 PARP10Q53GL7 1025 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 CCDC92Q53HC0 331 aaPredicted RBP3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 TEX44Q53QW1 395 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 TOR1AIP1Q5JTV8 583 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 KHDRBS2Q5VWX1 349 aaKnown RBP3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 SLX4IPQ5VYV7 408 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 DMKNQ6E0U4 476 aaPredicted RBP3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 HSD17B13Q7Z5P4 300 aaPredicted RBP3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 ZNF100Q8IYN0 542 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 CNNM3Q8NE01 707 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 NFAM1Q8NET5 270 aaPredicted RBP3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 OR56B1Q8NGI3 324 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 TMEM231Q9H6L2 316 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 P2RX2Q9UBL9 471 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 EXOSC1Q9Y3B2 195 aaKnown RBP3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 METP08581 1390 aa3.47□□□□□ -1.85
NCKAP1-208ENST00000495619 NCAPD2Q15021 1401 aa3.46□□□□□ -1.86
NCKAP1-208ENST00000495619 B4DXG7 233 aa3.46□□□□□ -1.86
NCKAP1-208ENST00000495619 H3BMH7 237 aa3.46□□□□□ -1.86
NCKAP1-208ENST00000495619 RASGRF2O14827 1237 aa3.46□□□□□ -1.86
NCKAP1-208ENST00000495619 TM9SF1O15321 606 aa3.46□□□□□ -1.86
NCKAP1-208ENST00000495619 MMP23AO75900 390 aa3.46□□□□□ -1.86
NCKAP1-208ENST00000495619 CABYRO75952 493 aa3.46□□□□□ -1.86
NCKAP1-208ENST00000495619 TGFAP01135 160 aa3.46□□□□□ -1.86
NCKAP1-208ENST00000495619 STSP08842 583 aa3.46□□□□□ -1.86
NCKAP1-208ENST00000495619 CCNA2P20248 432 aa3.46□□□□□ -1.86
NCKAP1-208ENST00000495619 DNAJB1P25685 340 aa3.46□□□□□ -1.86
NCKAP1-208ENST00000495619 HSPA1LP34931 641 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms