RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ROPN1LQ96C74 230 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 TBL1XR1Q9BZK7 514 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 FBXL2Q9UKC9 423 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 MKLN1Q9UL63 735 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 ABCG2Q9UNQ0 655 aa17.73■□□□□ 0.43
HDAC4-212ENST00000495497 NINQ8N4C6 2090 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 TRBV5-3A0A0A0MS03 114 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 A0A1B0GTH9 108 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 GMFGO60234 142 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 TRAPPC6AO75865 159 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 WISP1O95388 367 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 ANGPTL1O95841 491 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 AGR2O95994 175 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 DCTP40126 519 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 CLK3P49761 638 aaKnown RBP17.72■□□□□ 0.43
HDAC4-212ENST00000495497 ELOAQ14241 798 aaKnown RBP17.72■□□□□ 0.43
HDAC4-212ENST00000495497 SLC10A1Q14973 349 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 GPAT3Q53EU6 434 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 ATAD3BQ5T9A4 648 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 FGD2Q7Z6J4 655 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 PIGWQ7Z7B1 504 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 DHDDSQ86SQ9 333 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 SNX32Q86XE0 403 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 PLCZ1Q86YW0 608 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 CHERPQ8IWX8 916 aaKnown RBP17.72■□□□□ 0.43
HDAC4-212ENST00000495497 DUSP19Q8WTR2 217 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 TSPEARQ8WU66 669 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 CCDC106Q9BWC9 280 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 TRIM8Q9BZR9 551 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 UBQLN3Q9H347 655 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 DSN1Q9H410 356 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 UBQLN4Q9NRR5 601 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 MED11Q9P086 117 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 PPP4R1LQ9P1A2 415 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 B4GALT7Q9UBV7 327 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.72■□□□□ 0.43
HDAC4-212ENST00000495497 CAPN7Q9Y6W3 813 aa17.72■□□□□ 0.43
HDAC4-212ENST00000495497 CENPVL1A0A0U1RR11 272 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 ALG1L2C9J202 215 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 CCDC22O60826 627 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 STX11O75558 287 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 AK1P00568 194 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 NUDT7P0C024 238 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 ELAVL4P26378 380 aaKnown RBP17.71■□□□□ 0.43
HDAC4-212ENST00000495497 LCN1P31025 176 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 TOMM20Q15388 145 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 RGNQ15493 299 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 TYW3Q6IPR3 259 aaKnown RBP17.71■□□□□ 0.43
HDAC4-212ENST00000495497 BNC2Q6ZN30 1099 aaPredicted RBP17.71■□□□□ 0.43
HDAC4-212ENST00000495497 HMGN2P46Q86SG4 172 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 SPPL2CQ8IUH8 684 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 GHDCQ8N2G8 530 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 C10orf111Q8N326 155 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 DPP10Q8N608 796 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 POU5F2Q8N7G0 328 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 PRR7Q8TB68 274 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 ZNF350Q9GZX5 532 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 SLC6A15Q9H2J7 730 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 IKZF5Q9H5V7 419 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 TNFRSF10DQ9UBN6 386 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 KCNE5Q9UJ90 142 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 ADAM21Q9UKJ8 722 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 OSGIN2Q9Y236 505 aa17.71■□□□□ 0.43
HDAC4-212ENST00000495497 NPIPB9F8W1W9 429 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 SCDO00767 359 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 NDUFB5O43674 189 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 CBR3O75828 277 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 H6PDO95479 791 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 NGFRP08138 427 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 CHRM4P08173 479 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 HPGDP15428 266 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 TCEA1P23193 301 aaKnown RBP17.7■□□□□ 0.42
HDAC4-212ENST00000495497 ATP12AP54707 1039 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 DSTNP60981 165 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 CHRNEQ04844 493 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 NFYCQ13952 458 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 SELPLGQ14242 412 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 CAPRIN1Q14444 709 aaKnown RBP17.7■□□□□ 0.42
HDAC4-212ENST00000495497 MAPK11Q15759 364 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 CD226Q15762 336 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 EIPR1Q53HC9 387 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 RUNDC3AQ59EK9 446 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 REP15Q6BDI9 236 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 FRRS1Q6ZNA5 592 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 YRDCQ86U90 279 aaKnown RBP17.7■□□□□ 0.42
HDAC4-212ENST00000495497 TREML1Q86YW5 311 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 ZNF614Q8N883 585 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 OR4K17Q8NGC6 315 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 ZG16BQ96DA0 208 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 CCT8L2Q96SF2 557 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 MYLK2Q9H1R3 596 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 LDAHQ9H6V9 325 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 RUBCNLQ9H714 662 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 SDHAF3Q9NRP4 125 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 PLSCR2Q9NRY7 297 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 MRGBPQ9NV56 204 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 RELNP78509 3460 aa17.7■□□□□ 0.42
HDAC4-212ENST00000495497 UGT2B17O75795 530 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 IGHG3P01860 377 aa17.69■□□□□ 0.42
HDAC4-212ENST00000495497 NR2F1P10589 423 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms