RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 CCNJQ5T5M9 372 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 IL23RQ5VWK5 629 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 LRIG3Q6UXM1 1119 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 GRAMD2AQ8IUY3 354 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 HOMEZQ8IX15 550 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 KRTCAP2Q8N6L1 136 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 FNDC5Q8NAU1 212 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 OR4C3Q8NH37 302 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 JADE3Q92613 823 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 WNT2BQ93097 391 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 TUBGCP3Q96CW5 907 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 FAM120BQ96EK7 910 aaKnown RBP12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 C1GALT1C1Q96EU7 318 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 DTNBP1Q96EV8 351 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 TM9SF2Q99805 663 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 GPATCH1Q9BRR8 931 aaKnown RBP12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 ZCCHC3Q9NUD5 404 aaKnown RBP12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 JKAMPQ9P055 326 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 ZNF337Q9Y3M9 751 aa12.88□□□□□ -0.35
RPRD1B-206ENST00000495457 A0A1W2PRB8 838 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 OR2M5A3KFT3 312 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 SHISA8B8ZZ34 492 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 H3BML4 177 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 SEC14L5O43304 696 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 HCRTR2O43614 444 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 KCNK2O95069 426 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 OXSR1O95747 527 aaPredicted RBP12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 HSPA4LO95757 839 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 PEPDP12955 493 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 SUCLG1P53597 346 aaKnown RBP12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 C17orf67Q0P5P2 114 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 GANABQ14697 944 aaKnown RBP12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 LASP1Q14847 261 aaKnown RBP12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 MLC1Q15049 377 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 TESK1Q15569 626 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 CHI3L2Q15782 390 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 BCL2A1Q16548 175 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 FLYWCH1Q4VC44 716 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 EXOSC6Q5RKV6 272 aaKnown RBP12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 LUZP2Q86TE4 346 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 ZNF781Q8N8C0 355 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 GATSQ8NAP1 163 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 PPP1R14CQ8TAE6 165 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 LINC01560Q8TB33 94 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 FAM110BQ8TC76 370 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 LRRC46Q96FV0 321 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 PPP1R36Q96LQ0 422 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 SFXN3Q9BWM7 321 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 C20orf27Q9GZN8 174 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 PTGES2Q9H7Z7 377 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 DNAJB12Q9NXW2 375 aaKnown RBP12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 FOXD3Q9UJU5 478 aaPredicted RBP12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 SNX8Q9Y5X2 465 aa12.87□□□□□ -0.35
RPRD1B-206ENST00000495457 IGLV3-32A0A0A0MS00 114 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 ALG1L2C9J202 215 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 C6orf47O95873 294 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 HMGN2P05204 90 aaKnown RBP12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 ALOX5P09917 674 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 G6PDP11413 515 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 RPL3P39023 403 aaKnown RBP12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 PEX19P40855 299 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 DIO3P55073 304 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 CLDN20P56880 219 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 MPP2Q14168 576 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 PDCD2Q16342 344 aaPredicted RBP12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 CPTPQ5TA50 214 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 COX18Q8N8Q8 333 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 OR5P2Q8WZ92 322 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 SMPDL3BQ92485 455 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 FIG4Q92562 907 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 ZFP3Q96NJ6 502 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 NPAS1Q99742 590 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 KLHDC3Q9BQ90 382 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 CENPHQ9H3R5 247 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 CXorf36Q9H7Y0 433 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 RASSF1Q9NS23 344 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 RAB21Q9UL25 225 aa12.86□□□□□ -0.35
RPRD1B-206ENST00000495457 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 FAM221AA4D161 298 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 TUBAL3A6NHL2 446 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 SLC22A20A6NK97 555 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 NDUFB5O43674 189 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 TNFSF13O75888 250 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 SERPINE1P05121 402 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 DHRS4L1P0CG22 281 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 DDX5P17844 614 aaKnown RBP12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 TBXA2RP21731 343 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 DNAJA1P31689 397 aaKnown RBP12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 PRIM2P49643 509 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 CEP85LQ5SZL2 805 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 ZCCHC12Q6PEW1 402 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 CHMP1BQ7LBR1 199 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 P4HA3Q7Z4N8 544 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 RIMKLAQ8IXN7 391 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 MEIOBQ8N635 442 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 PSMA8Q8TAA3 256 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 FAM222BQ8WU58 562 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 CDS1Q92903 461 aa12.85□□□□□ -0.35
RPRD1B-206ENST00000495457 COQ8BQ96D53 544 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms