RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TBK1Q9UHD2 729 aa20.9■□□□□ 0.94
COL27A1-208ENST00000494780 FAM171A2A8MVW0 826 aa20.89■□□□□ 0.93
COL27A1-208ENST00000494780 ANGPTL1O95841 491 aa20.89■□□□□ 0.93
COL27A1-208ENST00000494780 SGCBQ16585 318 aa20.89■□□□□ 0.93
COL27A1-208ENST00000494780 TMEM44Q2T9K0 475 aa20.89■□□□□ 0.93
COL27A1-208ENST00000494780 Q71RC1 249 aaPredicted RBP20.89■□□□□ 0.93
COL27A1-208ENST00000494780 FAM214BQ7L5A3 538 aa20.89■□□□□ 0.93
COL27A1-208ENST00000494780 ZNF610Q8N9Z0 462 aa20.89■□□□□ 0.93
COL27A1-208ENST00000494780 ZNF395Q9H8N7 513 aaPredicted RBP20.89■□□□□ 0.93
COL27A1-208ENST00000494780 CCL27Q9Y4X3 112 aa20.89■□□□□ 0.93
COL27A1-208ENST00000494780 GXYLT2A0PJZ3 443 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 PROCP04070 461 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 UROSP10746 265 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 PRPS2P11908 318 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 PRPH2P23942 346 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 DNAJB13P59910 316 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 KIAA0040Q15053 153 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 GRAMD1BQ3KR37 738 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 VPS26BQ4G0F5 336 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 CFAP157Q5JU67 520 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 APOOLQ6UXV4 268 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 ZNF550Q7Z398 422 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 HOXB13Q92826 284 aaPredicted RBP20.88■□□□□ 0.93
COL27A1-208ENST00000494780 CAVIN3Q969G5 261 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 ZNF764Q96H86 408 aaPredicted RBP20.88■□□□□ 0.93
COL27A1-208ENST00000494780 MARK4Q96L34 752 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 CCL19Q99731 98 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 TXLNGYQ9BZA5 131 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 UBTD1Q9HAC8 227 aa20.88■□□□□ 0.93
COL27A1-208ENST00000494780 PCNX3Q9H6A9 2034 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 A0A1W2PPM1 405 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 NPIPB8E9PQR5 432 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 PDPK1O15530 556 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 SEC22BO75396 215 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 IGKV1D-16P01601 117 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 HEXAP06865 529 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 ZNF17P17021 662 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 TBXA2RP21731 343 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 MAP3K8P41279 467 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 HSPB3Q12988 150 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 CCDC153Q494R4 210 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 PRSS57Q6UWY2 283 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 C20orf204Q6ZNR8 217 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 SH2D5Q6ZV89 423 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 ZNF551Q7Z340 670 aaPredicted RBP20.87■□□□□ 0.93
COL27A1-208ENST00000494780 GGNQ86UU5 652 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 CEP70Q8NHQ1 597 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 GPR151Q8TDV0 419 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 PIK3R3Q92569 461 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 EGLN2Q96KS0 407 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 TNFRSF12AQ9NP84 129 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 EQTNQ9NQ60 294 aa20.87■□□□□ 0.93
COL27A1-208ENST00000494780 NSD1Q96L73 2696 aaPredicted RBP20.87■□□□□ 0.93
COL27A1-208ENST00000494780 A0A087WZY1 265 aa20.86■□□□□ 0.93
COL27A1-208ENST00000494780 ALG1L2C9J202 215 aa20.86■□□□□ 0.93
COL27A1-208ENST00000494780 AQP8O94778 261 aa20.86■□□□□ 0.93
COL27A1-208ENST00000494780 NKX2-2O95096 273 aa20.86■□□□□ 0.93
COL27A1-208ENST00000494780 FAM153BP0C7A2 387 aa20.86■□□□□ 0.93
COL27A1-208ENST00000494780 GPC1P35052 558 aa20.86■□□□□ 0.93
COL27A1-208ENST00000494780 FAM153CQ494X1 144 aa20.86■□□□□ 0.93
COL27A1-208ENST00000494780 CDRT4Q8N9R6 151 aa20.86■□□□□ 0.93
COL27A1-208ENST00000494780 ZC3HAV1LQ96H79 300 aaKnown RBP20.86■□□□□ 0.93
COL27A1-208ENST00000494780 COX4I2Q96KJ9 171 aa20.86■□□□□ 0.93
COL27A1-208ENST00000494780 PRRG4Q9BZD6 226 aa20.86■□□□□ 0.93
COL27A1-208ENST00000494780 KLHL4Q9C0H6 718 aa20.86■□□□□ 0.93
COL27A1-208ENST00000494780 IQCGQ9H095 443 aaKnown RBP20.86■□□□□ 0.93
COL27A1-208ENST00000494780 PAQR5Q9NXK6 330 aaPredicted RBP20.86■□□□□ 0.93
COL27A1-208ENST00000494780 EMC9Q9Y3B6 208 aa20.86■□□□□ 0.93
COL27A1-208ENST00000494780 SHISA8B8ZZ34 492 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 SLC28A1O00337 649 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 EIF1AYO14602 144 aaKnown RBP20.85■□□□□ 0.93
COL27A1-208ENST00000494780 GMFGO60234 142 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 PLIN3O60664 434 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 TBX19O60806 448 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 NGFRP08138 427 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 LOXP28300 417 aaPredicted RBP20.85■□□□□ 0.93
COL27A1-208ENST00000494780 CCT5P48643 541 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 WDR75Q8IWA0 830 aaKnown RBP20.85■□□□□ 0.93
COL27A1-208ENST00000494780 CEP112Q8N8E3 955 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 OR6K3Q8NGY3 331 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 ZFP28Q8NHY6 868 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 ARSGQ96EG1 525 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 GMPPAQ96IJ6 420 aaPredicted RBP20.85■□□□□ 0.93
COL27A1-208ENST00000494780 HS3ST6Q96QI5 342 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 LRTM1Q9HBL6 345 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 PLSCR4Q9NRQ2 329 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 OXSMQ9NWU1 459 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 C1orf109Q9NX04 203 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 NTMQ9P121 344 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 VDAC3Q9Y277 283 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 ARID1AO14497 2285 aa20.85■□□□□ 0.93
COL27A1-208ENST00000494780 UQCRHLA0A096LP55 91 aa20.84■□□□□ 0.93
COL27A1-208ENST00000494780 RGS14O43566 566 aa20.84■□□□□ 0.93
COL27A1-208ENST00000494780 NDUFB5O43674 189 aa20.84■□□□□ 0.93
COL27A1-208ENST00000494780 PPP3CBP16298 524 aa20.84■□□□□ 0.93
COL27A1-208ENST00000494780 IL11P20809 199 aa20.84■□□□□ 0.93
COL27A1-208ENST00000494780 EIF1AXP47813 144 aaKnown RBP20.84■□□□□ 0.93
COL27A1-208ENST00000494780 SLC6A8P48029 635 aa20.84■□□□□ 0.93
COL27A1-208ENST00000494780 C22orf34Q6ZV56 151 aa20.84■□□□□ 0.93
COL27A1-208ENST00000494780 EXOC3L1Q86VI1 746 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms