RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CCL4L1Q8NHW4 92 aa10.88□□□□□ -0.67
BRCA1-222ENST00000493919 MEGF10Q96KG7 1140 aa10.88□□□□□ -0.67
BRCA1-222ENST00000493919 TRIM56Q9BRZ2 755 aaKnown RBP10.88□□□□□ -0.67
BRCA1-222ENST00000493919 TMED9Q9BVK6 235 aa10.88□□□□□ -0.67
BRCA1-222ENST00000493919 ZFP57Q9NU63 452 aa10.88□□□□□ -0.67
BRCA1-222ENST00000493919 FTSJ1Q9UET6 329 aa10.88□□□□□ -0.67
BRCA1-222ENST00000493919 USP22Q9UPT9 525 aa10.88□□□□□ -0.67
BRCA1-222ENST00000493919 CNOT1A5YKK6 2376 aaKnown RBP10.87□□□□□ -0.67
BRCA1-222ENST00000493919 RPS10-NUDT3A0A1W2PQS6 291 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 FAM149AA5PLN7 773 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 OR2AG2A6NM03 316 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 E9PI62 339 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 FADS1O60427 444 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 C9P02748 559 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 ACP5P13686 325 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 AK4P27144 223 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-222ENST00000493919 NMBRP28336 390 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 THBS4P35443 961 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 CAPGP40121 348 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 ID4P47928 161 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 RAB25P57735 213 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 CACNG1Q06432 222 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 TNFRSF9Q07011 255 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 TMEM115Q12893 351 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-222ENST00000493919 ACTBL2Q562R1 376 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 CCDC157Q569K6 752 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 VASNQ6EMK4 673 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 ZNF517Q6ZMY9 492 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-222ENST00000493919 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.87□□□□□ -0.67
BRCA1-222ENST00000493919 KANSL1Q7Z3B3 1105 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 GKN2Q86XP6 184 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 CDK20Q8IZL9 346 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 FSTL5Q8N475 847 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-222ENST00000493919 DLG3Q92796 817 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 CORO2AQ92828 525 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 RAB24Q969Q5 203 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 ULK4Q96C45 1275 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 L3HYPDHQ96EM0 354 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 MFSD3Q96ES6 412 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 TPD52L3Q96J77 140 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 PWWP2AQ96N64 755 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 PKP2Q99959 881 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 CITED2Q99967 270 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-222ENST00000493919 HDHD5Q9BXW7 423 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 ADAM19Q9H013 955 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 NANSQ9NR45 359 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 KRT84Q9NSB2 600 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 PAK1IP1Q9NWT1 392 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-222ENST00000493919 RIMS3Q9UJD0 308 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 WASF3Q9UPY6 502 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 PLEKHM1Q9Y4G2 1056 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 CLDN16Q9Y5I7 305 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 KCNMB2Q9Y691 235 aa10.87□□□□□ -0.67
BRCA1-222ENST00000493919 SLC22A23A1A5C7 686 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 BLACEA4D250 179 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 B4DGG1 531 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 PHGDHO43175 533 aaKnown RBP10.86□□□□□ -0.67
BRCA1-222ENST00000493919 GRID2O43424 1007 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 F10P00742 488 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 DAOP14920 347 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 SPNP16150 400 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 IL11P20809 199 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 DTYMKP23919 212 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 PSMB6P28072 239 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 ALDH3B1P43353 468 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 GPR4P46093 362 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 LIMS1P48059 325 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 HSPA7P48741 367 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 HLCSP50747 726 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 NAGLUP54802 743 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 HIF1AQ16665 826 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 HKDC1Q2TB90 917 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 PYCR3Q53H96 274 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 COLEC12Q5KU26 742 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 EXOSC6Q5RKV6 272 aaKnown RBP10.86□□□□□ -0.67
BRCA1-222ENST00000493919 SPNS3Q6ZMD2 512 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 PRSS48Q7RTY5 328 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 LHFPL4Q7Z7J7 247 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 PIP4P1Q86T03 277 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 SERPINA9Q86WD7 417 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 UNC5BQ8IZJ1 945 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 NXPE1Q8N323 547 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 PNPLA1Q8N8W4 532 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 POMGNT2Q8NAT1 580 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 PLPP7Q8NBV4 271 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 OR4C6Q8NH72 309 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 LKAAEAR1Q8TD35 194 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 GPBAR1Q8TDU6 330 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 HYLS1Q96M11 299 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 ZNF2Q9BSG1 426 aaPredicted RBP10.86□□□□□ -0.67
BRCA1-222ENST00000493919 FBXO34Q9NWN3 711 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 DLL3Q9NYJ7 618 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 RDH8Q9NYR8 311 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 NLGN3Q9NZ94 848 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 KCNK6Q9Y257 313 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 SDR42E2A6NKP2 422 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 LMO7DNF2Z398 122 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 YY2O15391 372 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 DLEU1O43261 78 aa10.86□□□□□ -0.67
BRCA1-222ENST00000493919 SUV39H1O43463 412 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms