RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 RASSF5Q8WWW0 418 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 HAS2Q92819 552 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 OTUB1Q96FW1 271 aaPredicted RBP11.44□□□□□ -0.58
SNX17-208ENST00000493711 RNF145Q96MT1 663 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 ADOQ96SZ5 270 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 TREX2Q9BQ50 279 aaPredicted RBP11.44□□□□□ -0.58
SNX17-208ENST00000493711 CADM1Q9BY67 442 aaKnown RBP11.44□□□□□ -0.58
SNX17-208ENST00000493711 TRIM8Q9BZR9 551 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 ADNPQ9H2P0 1102 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 EVA1AQ9H8M9 152 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 LIN28AQ9H9Z2 209 aaKnown RBP11.44□□□□□ -0.58
SNX17-208ENST00000493711 ZBTB20Q9HC78 741 aaPredicted RBP11.44□□□□□ -0.58
SNX17-208ENST00000493711 TIMMDC1Q9NPL8 285 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 PRDM4Q9UKN5 801 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 IGSF10Q6WRI0 2623 aa11.44□□□□□ -0.58
SNX17-208ENST00000493711 APC2O95996 2303 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 DSPPQ9NZW4 1301 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 ANKRD33BA6NCL7 494 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 OR5H15A6NDH6 313 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 OR6B1O95007 311 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 UTS2O95399 124 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 C1QCP02747 245 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 DBIP07108 87 aaKnown RBP11.43□□□□□ -0.58
SNX17-208ENST00000493711 TBXA2RP21731 343 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 RHDQ02161 417 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 OC90Q02509 493 aaPredicted RBP11.43□□□□□ -0.58
SNX17-208ENST00000493711 TRAP1Q12931 704 aaKnown RBP11.43□□□□□ -0.58
SNX17-208ENST00000493711 TRIM25Q14258 630 aaKnown RBP11.43□□□□□ -0.58
SNX17-208ENST00000493711 LARS2Q15031 903 aaKnown RBP11.43□□□□□ -0.58
SNX17-208ENST00000493711 ZNF141Q15928 474 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 FXNQ16595 210 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 MTX3Q5HYI7 312 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 PGM2L1Q6PCE3 622 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 FIGNL1Q6PIW4 674 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 LYPD8Q6UX82 237 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 IL20RBQ6UXL0 311 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 FRRS1Q6ZNA5 592 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 MISPQ8IVT2 679 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 CMIPQ8IY22 773 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 EID3Q8N140 333 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 CYP4Z2PQ8N1L4 340 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 ZADH2Q8N4Q0 377 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 FAM13CQ8NE31 585 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 FDCSPQ8NFU4 85 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 MAL2Q969L2 176 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 EFHD2Q96C19 240 aaPredicted RBP11.43□□□□□ -0.58
SNX17-208ENST00000493711 DTNBP1Q96EV8 351 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 RAB3IPQ96QF0 476 aaPredicted RBP11.43□□□□□ -0.58
SNX17-208ENST00000493711 TRIM15Q9C019 465 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 SLC38A1Q9H2H9 487 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 PRORYQ9H606 182 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 PIF1Q9H611 641 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 SDHAF3Q9NRP4 125 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 SNX13Q9Y5W8 968 aa11.43□□□□□ -0.58
SNX17-208ENST00000493711 HELZ2Q9BYK8 2649 aaKnown RBP11.42□□□□□ -0.58
SNX17-208ENST00000493711 A0A1W2PQD3 144 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 AGAP5A6NIR3 686 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 CXCR6O00574 342 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 SCDO00767 359 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 FCMRO60667 390 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 CIB2O75838 187 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 WDPCPO95876 746 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 IGKV1D-16P01601 117 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 THBS1P07996 1170 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 CHRM4P08173 479 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 SFTPCP11686 197 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 CYP4B1P13584 511 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 HOXB6P17509 224 aaKnown RBP11.42□□□□□ -0.58
SNX17-208ENST00000493711 GGT1P19440 569 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 KDELR2P33947 212 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 DCTP40126 519 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 CD96P40200 585 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 RFX3P48380 749 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 PCBP3P57721 371 aaKnown RBP11.42□□□□□ -0.58
SNX17-208ENST00000493711 ARG2P78540 354 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 CHRNEQ04844 493 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 FUT5Q11128 374 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 TUBA3CQ13748 450 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 LAPTM4AQ15012 233 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 MAPK11Q15759 364 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 LIN52Q52LA3 116 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 CCNJQ5T5M9 372 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 SLC22A10Q63ZE4 541 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 TYW3Q6IPR3 259 aaKnown RBP11.42□□□□□ -0.58
SNX17-208ENST00000493711 SLC30A6Q6NXT4 461 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 TUBA3EQ6PEY2 450 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 C16orf47Q6ZP98 133 aaPredicted RBP11.42□□□□□ -0.58
SNX17-208ENST00000493711 LINC00696Q6ZRV3 163 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 ULK2Q8IYT8 1036 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 PRR22Q8IZ63 422 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 C10orf111Q8N326 155 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 RNF148Q8N7C7 305 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 OR52E4Q8NGH9 312 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 SLC26A7Q8TE54 656 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 PAQR8Q8TEZ7 354 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 LZICQ8WZA0 190 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 HGDQ93099 445 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 ASB9Q96DX5 294 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 ARHGAP9Q9BRR9 750 aa11.42□□□□□ -0.58
SNX17-208ENST00000493711 TBL1XR1Q9BZK7 514 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms