RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 NPHS1O60500 1241 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 LYPLA1O75608 230 aaPredicted RBP7.9□□□□□ -1.14
NUP50-217ENST00000491860 TNFSF13O75888 250 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 SMNDC1O75940 238 aaKnown RBP eCLIP7.9□□□□□ -1.14
NUP50-217ENST00000491860 NKX2-2O95096 273 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 ATE1O95260 518 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 UTS2O95399 124 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 ANGPTL1O95841 491 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 HRGP04196 525 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 FGF4P08620 206 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 FAM153BP0C7A2 387 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 PABPC4LP0CB38 370 aaKnown RBP7.9□□□□□ -1.14
NUP50-217ENST00000491860 FPR1P21462 350 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 ME2P23368 584 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 GABRA3P34903 492 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 CPOXP36551 454 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 HPCAL1P37235 193 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 EIF1P41567 113 aaKnown RBP7.9□□□□□ -1.14
NUP50-217ENST00000491860 FRKP42685 505 aaPredicted RBP7.9□□□□□ -1.14
NUP50-217ENST00000491860 PRIM2P49643 509 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 B3GALT5-AS1P59052 145 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 SLC18A2Q05940 514 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 HSPB3Q12988 150 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 SNTB1Q13884 538 aaKnown RBP7.9□□□□□ -1.14
NUP50-217ENST00000491860 MLC1Q15049 377 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 KIAA0040Q15053 153 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 SGCBQ16585 318 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.9□□□□□ -1.14
NUP50-217ENST00000491860 FAM153CQ494X1 144 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 SHEQ5VZ18 495 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 GTF2IRD2BQ6EKJ0 949 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 GTF2IRD2Q86UP8 949 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 WDR75Q8IWA0 830 aaKnown RBP7.9□□□□□ -1.14
NUP50-217ENST00000491860 UBQLNLQ8IYU4 475 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 GCNT2Q8N0V5 402 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 CNEP1R1Q8N9A8 125 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 ZNF527Q8NB42 609 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 NUP43Q8NFH3 380 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 GPR151Q8TDV0 419 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 ACTRT2Q8TDY3 377 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 DUSP19Q8WTR2 217 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 NRGNQ92686 78 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 PIGTQ969N2 578 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 MOAP1Q96BY2 351 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 C1GALT1C1Q96EU7 318 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 PGM2Q96G03 612 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 ZNF845Q96IR2 970 aaPredicted RBP7.9□□□□□ -1.14
NUP50-217ENST00000491860 PPP3R2Q96LZ3 170 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 PRPF18Q99633 342 aaKnown RBP7.9□□□□□ -1.14
NUP50-217ENST00000491860 PIP5K1AQ99755 562 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 PRRG4Q9BZD6 226 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 HOXD1Q9GZZ0 328 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 PLEKHF2Q9H8W4 249 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 RNF122Q9H9V4 155 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 UBQLN4Q9NRR5 601 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 MED11Q9P086 117 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 MCTS1Q9ULC4 181 aaKnown RBP7.9□□□□□ -1.14
NUP50-217ENST00000491860 PROCRQ9UNN8 238 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 EMC9Q9Y3B6 208 aa7.9□□□□□ -1.14
NUP50-217ENST00000491860 OR2M5A3KFT3 312 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 C7orf72A4D263 438 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 H3BML4 177 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 C16orf97H3BN30 126 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 SCDO00767 359 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 CTIFO43310 598 aaKnown RBP7.89□□□□□ -1.15
NUP50-217ENST00000491860 TMCC2O75069 709 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 TGM6O95932 706 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 ALOX5P09917 674 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 POU2F1P14859 743 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 TBXA2RP21731 343 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 MAP3K8P41279 467 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 RFX3P48380 749 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 KCNJ5P48544 419 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 ZNF41P51814 821 aaPredicted RBP7.89□□□□□ -1.15
NUP50-217ENST00000491860 RPL38P63173 70 aaKnown RBP7.89□□□□□ -1.15
NUP50-217ENST00000491860 STX5Q13190 355 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 MAD2L1Q13257 205 aaPredicted RBP7.89□□□□□ -1.15
NUP50-217ENST00000491860 PDE7AQ13946 482 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 BHLHB9Q6PI77 547 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 C20orf204Q6ZNR8 217 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 FAM214BQ7L5A3 538 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 MTERF4Q7Z6M4 381 aaKnown RBP7.89□□□□□ -1.15
NUP50-217ENST00000491860 STK32CQ86UX6 486 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 EXOC3L1Q86VI1 746 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 KIRREL3Q8IZU9 778 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 LRRC75A-AS1Q8N1F1 130 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 OR6K3Q8NGY3 331 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 ARL8AQ96BM9 186 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 STARD4Q96DR4 205 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 APOPT1Q96IL0 206 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 FAM111AQ96PZ2 611 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 STACQ99469 402 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 MED18Q9BUE0 208 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 PINK1Q9BXM7 581 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 ROPN1BQ9BZX4 212 aaPredicted RBP7.89□□□□□ -1.15
NUP50-217ENST00000491860 OR10A4Q9H209 315 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 ROPN1Q9HAT0 212 aaPredicted RBP7.89□□□□□ -1.15
NUP50-217ENST00000491860 TIGARQ9NQ88 270 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 DUSP22Q9NRW4 184 aa7.89□□□□□ -1.15
NUP50-217ENST00000491860 SH3BP4Q9P0V3 963 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms