RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 KLHL13Q9P2N7 655 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 STOML1Q9UBI4 398 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 PRSS50Q9UI38 385 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 CES1P1Q9UKY3 287 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 PSAT1Q9Y617 370 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 CMYA5Q8N3K9 4069 aa12.04□□□□□ -0.48
EXOSC3-207ENST00000490516 NPIPA5A0A0B4J1W7 369 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 FAM95CA0A1B0GW59 222 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 NPIPA7E9PJI5 369 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 NDUFB5O43674 189 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 NPIPA8P0DM63 369 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 PTAFRP25105 342 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 ARFIP2P53365 341 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 DVL1P1P54792 670 aaPredicted RBP12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 MST1LQ2TV78 715 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 TRMT10BQ6PF06 316 aaKnown RBP12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 Q6ZT83 130 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 LRRC70Q7Z2Q7 622 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 MARCH3Q86UD3 253 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 MYLK4Q86YV6 388 aaPredicted RBP12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 IGDCC3Q8IVU1 814 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 NAT8LQ8N9F0 302 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 OSTF1Q92882 214 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 EXT2Q93063 718 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 MRPL24Q96A35 216 aaKnown RBP12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 MTBPQ96DY7 904 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 SNX18Q96RF0 628 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 SAYSD1Q9NPB0 183 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 ZKSCAN5Q9Y2L8 839 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 ATP23Q9Y6H3 246 aa12.03□□□□□ -0.48
EXOSC3-207ENST00000490516 A0A1W2PR80 420 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 GOLGA6L10A6NI86 522 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 LILRA1O75019 489 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 CLDN9O95484 217 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 TTC4O95801 387 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 FGGP02679 453 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 CTAGE8P0CG41 777 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 ARAFP10398 606 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 GGT1P19440 569 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 CSNK2A2P19784 350 aaPredicted RBP12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 IGHV1-2P23083 117 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 EDNRAP25101 427 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 LIMS1P48059 325 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 CHN2P52757 468 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 CUL3Q13618 768 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 ZNF239Q16600 458 aaKnown RBP12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 CDKL4Q5MAI5 379 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 SLC48A1Q6P1K1 146 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 ESPNLQ6ZVH7 1005 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 USP43Q70EL4 1123 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 TBC1D1Q86TI0 1168 aaPredicted RBP12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 SLC44A2Q8IWA5 706 aaPredicted RBP12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 CTAGE4Q8IX94 777 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 RNF10Q8N5U6 811 aaKnown RBP12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 PDPRQ8NCN5 879 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 ZNF540Q8NDQ6 660 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 OR52N5Q8NH56 324 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 HPS1Q92902 700 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 FBXO17Q96EF6 278 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 VSTM2LQ96N03 204 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 DERL2Q9GZP9 239 aa12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 MYOZ1Q9NP98 299 aaPredicted RBP12.02□□□□□ -0.49
EXOSC3-207ENST00000490516 OR5H1A6NKK0 313 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 M0R1B8 84 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 PGM3O95394 542 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 KLK1P06870 262 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 TACSTD2P09758 323 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 ZFP36P26651 326 aaKnown RBP12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 APOBEC3AP31941 199 aaPredicted RBP12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 CARD18P57730 90 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 RAC1P63000 192 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 MRPS22P82650 360 aaKnown RBP12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 CHRNEQ04844 493 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 RNPS1Q15287 305 aaKnown RBP12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 SWI5Q1ZZU3 235 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 MSS51Q4VC12 460 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 ZC3HC1Q86WB0 502 aaKnown RBP12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 REXO5Q96IC2 774 aaKnown RBP12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 VRK1Q99986 396 aaPredicted RBP12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 C1QTNF6Q9BXI9 259 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 SRXN1Q9BYN0 137 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 MYNNQ9NPC7 610 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 TSC22D4Q9Y3Q8 395 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 OR10H1Q9Y4A9 318 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 PCDHA9Q9Y5H5 950 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 WNK1Q9H4A3 2382 aa12.01□□□□□ -0.49
EXOSC3-207ENST00000490516 RYR3Q15413 4870 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 SLU7O95391 586 aaKnown RBP12□□□□□ -0.49
EXOSC3-207ENST00000490516 STAMBPO95630 424 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 S100BP04271 92 aaPredicted RBP12□□□□□ -0.49
EXOSC3-207ENST00000490516 YES1P07947 543 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 PABPC4LP0CB38 370 aaKnown RBP12□□□□□ -0.49
EXOSC3-207ENST00000490516 ZNF17P17021 662 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 PCMT1P22061 227 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 SHC1P29353 583 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 OR3A2P47893 321 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 PHEXP78562 749 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 SCGB2A2Q13296 93 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 CCNIQ14094 377 aa12□□□□□ -0.49
EXOSC3-207ENST00000490516 TTC27Q6P3X3 843 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms