RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 ZNF347Q96SE7 839 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 ARHGDIGQ99819 225 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 LIN28AQ9H9Z2 209 aaKnown RBP19.26■□□□□ 0.67
SND1-214ENST00000489417 CHST2Q9Y4C5 530 aa19.26■□□□□ 0.67
SND1-214ENST00000489417 DPM1O60762 260 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 REM1O75628 298 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 IL12BP29460 328 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 LCN1P31025 176 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 PDZK1Q5T2W1 519 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 RNF220Q5VTB9 566 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 RAB43Q86YS6 212 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 LACC1Q8IV20 430 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 CLIP4Q8N3C7 705 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 DIO2Q92813 273 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 OMA1Q96E52 524 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 TACO1Q9BSH4 297 aaKnown RBP19.25■□□□□ 0.67
SND1-214ENST00000489417 DEFB126Q9BYW3 111 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 KLHL4Q9C0H6 718 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 HOXD1Q9GZZ0 328 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 ZNF160Q9HCG1 818 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 MMP25Q9NPA2 562 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 FAM32AQ9Y421 112 aaKnown RBP19.25■□□□□ 0.67
SND1-214ENST00000489417 DTNAQ9Y4J8 743 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 CLDN24A6NM45 220 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 PEX1O43933 1283 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 TSPAN2O60636 221 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 DNAJB5O75953 348 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 HPP00738 406 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 NRG3P56975 720 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 CAMK2BQ13554 666 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 IL10RAQ13651 578 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 THAP3Q8WTV1 239 aaPredicted RBP19.25■□□□□ 0.67
SND1-214ENST00000489417 OIT3Q8WWZ8 545 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 CIB1Q99828 191 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 WFDC6Q9BQY6 131 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 C9orf16Q9BUW7 83 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 ARMC7Q9H6L4 198 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.25■□□□□ 0.67
SND1-214ENST00000489417 VNN3Q9NY84 501 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 OAZ3Q9UMX2 235 aa19.25■□□□□ 0.67
SND1-214ENST00000489417 MRPS18BQ9Y676 258 aaKnown RBP19.25■□□□□ 0.67
SND1-214ENST00000489417 TMEM200CA6NKL6 621 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 UTS2O95399 124 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 CELA2AP08217 269 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 ZNF23P17027 643 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 RHCEP18577 417 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 ABCD3P28288 659 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 YAP1P46937 504 aaKnown RBP19.24■□□□□ 0.67
SND1-214ENST00000489417 RTP5Q14D33 572 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 MRPL2Q5T653 305 aaKnown RBP19.24■□□□□ 0.67
SND1-214ENST00000489417 DEF8Q6ZN54 512 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 C16orf47Q6ZP98 133 aaPredicted RBP19.24■□□□□ 0.67
SND1-214ENST00000489417 MRGPREQ86SM8 312 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 CYP4Z1Q86W10 505 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 RBM45Q8IUH3 476 aaKnown RBP19.24■□□□□ 0.67
SND1-214ENST00000489417 EPHX4Q8IUS5 362 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 TAGAPQ8N103 731 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 ZNF614Q8N883 585 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 KIAA1143Q96AT1 154 aaPredicted RBP19.24■□□□□ 0.67
SND1-214ENST00000489417 ADOQ96SZ5 270 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 PIP5K1AQ99755 562 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 RLIMQ9NVW2 624 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 IL17BQ9UHF5 180 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 FBXL4Q9UKA2 621 aa19.24■□□□□ 0.67
SND1-214ENST00000489417 CDHR4A6H8M9 788 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 J3KTA2 159 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 WWP2O00308 870 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 ADAMDEC1O15204 470 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 E2F6O75461 281 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 NADKO95544 446 aaPredicted RBP19.23■□□□□ 0.67
SND1-214ENST00000489417 LIPCP11150 499 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 CYP4B1P13584 511 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 RNF144AP50876 292 aaPredicted RBP19.23■□□□□ 0.67
SND1-214ENST00000489417 IST1P53990 364 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 PNLIPRP2P54317 469 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 FGFBP1Q14512 234 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 NPTX1Q15818 432 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 ZNF527Q8NB42 609 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 OR6T1Q8NGN1 323 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 OR4C3Q8NH37 302 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 COQ10BQ9H8M1 238 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 REEP1Q9H902 201 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 GPN2Q9H9Y4 310 aaPredicted RBP19.23■□□□□ 0.67
SND1-214ENST00000489417 UBQLN4Q9NRR5 601 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 P4HTMQ9NXG6 502 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 FLRT3Q9NZU0 649 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 TESMINQ9Y4I5 508 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 NPFFR2Q9Y5X5 522 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 AK5Q9Y6K8 562 aa19.23■□□□□ 0.67
SND1-214ENST00000489417 FRS3O43559 492 aa19.22■□□□□ 0.67
SND1-214ENST00000489417 HS6ST1O60243 411 aa19.22■□□□□ 0.67
SND1-214ENST00000489417 RRM2P31350 389 aa19.22■□□□□ 0.67
SND1-214ENST00000489417 RGS8P57771 180 aaPredicted RBP19.22■□□□□ 0.67
SND1-214ENST00000489417 SPIBQ01892 262 aa19.22■□□□□ 0.67
SND1-214ENST00000489417 ZSWIM7Q19AV6 140 aa19.22■□□□□ 0.67
SND1-214ENST00000489417 TCTN3Q6NUS6 607 aa19.22■□□□□ 0.67
SND1-214ENST00000489417 ZBTB49Q6ZSB9 765 aa19.22■□□□□ 0.67
SND1-214ENST00000489417 ZNF605Q86T29 641 aa19.22■□□□□ 0.67
SND1-214ENST00000489417 SVOPLQ8N434 492 aa19.22■□□□□ 0.67
SND1-214ENST00000489417 OR5K1Q8NHB7 308 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms