RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 NPY2RP49146 381 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 P2RY4P51582 365 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 GNB2P62879 340 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 TPD52L1Q16890 204 aaPredicted RBP2.41□□□□□ -2.02
RFC4-213ENST00000489028 SHROOM1Q2M3G4 852 aaPredicted RBP2.41□□□□□ -2.02
RFC4-213ENST00000489028 ZNF528Q3MIS6 628 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 DCAF4L1Q3SXM0 396 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 GLYR1Q49A26 553 aaPredicted RBP2.41□□□□□ -2.02
RFC4-213ENST00000489028 ZNF658Q5TYW1 1059 aaPredicted RBP2.41□□□□□ -2.02
RFC4-213ENST00000489028 LRRC8BQ6P9F7 803 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 PPP1R42Q7Z4L9 355 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 GOLGA7Q7Z5G4 137 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 ADGRD2Q7Z7M1 963 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 AMZ2Q86W34 360 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 ZNF573Q86YE8 665 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 MLKLQ8NB16 471 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 GMCL1P1Q8NEA9 526 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 FBXO30Q8TB52 745 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 GIPC3Q8TF64 312 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 TMEM37Q8WXS4 190 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 DNAJA3Q96EY1 480 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 C16orf74Q96GX8 76 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 DPH7Q9BTV6 452 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 ZNF416Q9BWM5 594 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 HES7Q9BYE0 225 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 ELOVL4Q9GZR5 314 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 OPN3Q9H1Y3 402 aaPredicted RBP2.41□□□□□ -2.02
RFC4-213ENST00000489028 ALG9Q9H6U8 611 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 ACTR8Q9H981 624 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 COG4Q9H9E3 785 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 TMOD2Q9NZR1 351 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 DPM3Q9P2X0 92 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 ATXN10Q9UBB4 475 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 LHX3Q9UBR4 397 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 RPS6KB2Q9UBS0 482 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 DUSP12Q9UNI6 340 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 ZNF175Q9Y473 711 aa2.41□□□□□ -2.02
RFC4-213ENST00000489028 DDX49Q9Y6V7 483 aaKnown RBP2.41□□□□□ -2.02
RFC4-213ENST00000489028 CHD4Q14839 1912 aa2.4□□□□□ -2.02
RFC4-213ENST00000489028 MPHOSPH10O00566 681 aaKnown RBP2.4□□□□□ -2.03
RFC4-213ENST00000489028 MAPK13O15264 365 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 CFLARO15519 480 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 SDC3O75056 442 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 APBB3O95704 486 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 IGHV3-23P01764 117 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 PCCBP05166 539 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 KRT8P05787 483 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 THRBP10828 461 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 ZP3P21754 424 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 SOX6P35712 828 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 IFNAR2P48551 515 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 SGSHP51688 502 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 NAPAP54920 295 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 HERVK_113P63132 956 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 ERVK-8P63133 956 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 ELP6Q0PNE2 266 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 OVGP1Q12889 678 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 ZNF699Q32M78 642 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 TMEM41BQ5BJD5 291 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 KHDRBS2Q5VWX1 349 aaKnown RBP2.4□□□□□ -2.03
RFC4-213ENST00000489028 PRR5LQ6MZQ0 368 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 SLC25A24Q6NUK1 477 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 TBC1D21Q8IYX1 336 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 CENPLQ8N0S6 344 aaPredicted RBP2.4□□□□□ -2.03
RFC4-213ENST00000489028 OR10T2Q8NGX3 314 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 OR52J3Q8NH60 311 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 DLX4Q92988 240 aaPredicted RBP2.4□□□□□ -2.03
RFC4-213ENST00000489028 RAB7BQ96AH8 199 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 SLC25A38Q96DW6 304 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 DTNBP1Q96EV8 351 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 ZNF799Q96GE5 643 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 DEFB118Q96PH6 123 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 PLEKHF1Q96S99 279 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 TXN2Q99757 166 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 NDUFAF3Q9BU61 184 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 ERVK-6Q9BXR3 956 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 NMUR2Q9GZQ4 415 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 RPAP3Q9H6T3 665 aaPredicted RBP2.4□□□□□ -2.03
RFC4-213ENST00000489028 MEPEQ9NQ76 525 aaPredicted RBP2.4□□□□□ -2.03
RFC4-213ENST00000489028 YAE1D1Q9NRH1 226 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 MIOXQ9UGB7 285 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 LAMP5Q9UJQ1 280 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 PURGQ9UJV8 347 aaKnown RBP2.4□□□□□ -2.03
RFC4-213ENST00000489028 IKBKGQ9Y6K9 419 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 MEGF6O75095 1541 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 COL4A4P53420 1690 aaPredicted RBP2.4□□□□□ -2.03
RFC4-213ENST00000489028 ABCC4O15439 1325 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 ZMYM6O95789 1325 aa2.4□□□□□ -2.03
RFC4-213ENST00000489028 TNRQ92752 1358 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 SYNJ2BP-COX16A0A087WUM0 186 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 A0A0J9YVX5 310 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 C11orf98E9PRG8 122 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 PDXKO00764 312 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 CHADO15335 359 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 ADAM12O43184 909 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 GMFGO60234 142 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 SERF1AO75920 110 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 NOL4O94818 638 aa2.39□□□□□ -2.03
RFC4-213ENST00000489028 NDUFA7O95182 113 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms