RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 NAALAD2Q9Y3Q0 740 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 MROH7-TTC4A0A0A0MT08 1334 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 MROH5Q6ZUA9 1318 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 EML5Q05BV3 1969 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 OTOGQ6ZRI0 2925 aa3.32□□□□□ -1.88
ITGB1-214ENST00000488427 ADGRG4Q8IZF6 3080 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 CRYBG3Q68DQ2 2970 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 KNTC1P50748 2209 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 MYH8P13535 1937 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 NAV1Q8NEY1 1877 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 A4D1N5 150 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 ZNF487B1APH4 448 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 CHEK1O14757 476 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 CTAGE5O15320 804 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 NUDT14O95848 222 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 SBK2P0C263 348 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 ZNF806P0C7X5 589 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 TPBGLP0DKB5 382 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 HOXB8P17481 243 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-214ENST00000488427 CYP3A5P20815 502 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 CSRP1P21291 193 aaKnown RBP3.31□□□□□ -1.88
ITGB1-214ENST00000488427 GJB2P29033 226 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 ID1P41134 155 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 RPL27P61353 136 aaKnown RBP3.31□□□□□ -1.88
ITGB1-214ENST00000488427 CYLC2Q14093 348 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-214ENST00000488427 GIT2Q14161 759 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 STX1AQ16623 288 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 ASPGQ86U10 573 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 C10orf53Q8N6V4 93 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 SIDT2Q8NBJ9 832 aaKnown RBP3.31□□□□□ -1.88
ITGB1-214ENST00000488427 VN1R2Q8NFZ6 395 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 TBCKQ8TEA7 893 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 SAP25Q8TEE9 199 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 PCED1BQ96HM7 432 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 TSPYL1Q9H0U9 437 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 ZBP1Q9H171 429 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 GANQ9H2C0 597 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 ACOXLQ9NUZ1 547 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 VPS54Q9P1Q0 977 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 STX8Q9UNK0 236 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 SLC6A5Q9Y345 797 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 F5P12259 2224 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 DNHD1Q96M86 4753 aa3.31□□□□□ -1.88
ITGB1-214ENST00000488427 BOD1L1Q8NFC6 3051 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 CCDC168Q8NDH2 2452 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 FRMPD4Q14CM0 1322 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 PSMD3O43242 534 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 LRRTM2O43300 516 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 TRIM16O95361 564 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 SEMA4FO95754 770 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 PIGRP01833 764 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 CXCL10P02778 98 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 THY1P04216 161 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 PGK2P07205 417 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 ASNSP08243 561 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 UROSP10746 265 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 P4HA1P13674 534 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 VCLP18206 1134 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 GPX3P22352 226 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 MAGEA9P43362 315 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 TNFSF10P50591 281 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 GEMP55040 296 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 RCN2Q14257 317 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 SLMAPQ14BN4 828 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 HAGHQ16775 308 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 ANKRD55Q3KP44 614 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 FHL5Q5TD97 284 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 NHLRC1Q6VVB1 395 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 KCTD9Q7L273 389 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 CCDC91Q7Z6B0 441 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 CNOT6LQ96LI5 555 aaKnown RBP3.3□□□□□ -1.88
ITGB1-214ENST00000488427 EDEM2Q9BV94 578 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 TRIM4Q9C037 500 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 TNFRSF19Q9NS68 423 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 FBXW2Q9UKT8 454 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 SLC9A8Q9Y2E8 581 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 ATG4BQ9Y4P1 393 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 FBN1P35555 2871 aaKnown RBP3.3□□□□□ -1.88
ITGB1-214ENST00000488427 THADAQ6YHU6 1953 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 CELSR2Q9HCU4 2923 aa3.3□□□□□ -1.88
ITGB1-214ENST00000488427 PDCD11Q14690 1871 aaKnown RBP3.29□□□□□ -1.88
ITGB1-214ENST00000488427 FOCADQ5VW36 1801 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 TSPAN2O60636 221 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 RHBDL1O75783 438 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 CPNE6O95741 557 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 SNAI1O95863 264 aaPredicted RBP3.29□□□□□ -1.88
ITGB1-214ENST00000488427 DNAJB1P25685 340 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 OR1D2P34982 312 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 SERPINB6P35237 376 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 GYG1P46976 350 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 SERPINH1P50454 418 aaKnown RBP3.29□□□□□ -1.88
ITGB1-214ENST00000488427 KRT83P78385 493 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 POU5F1Q01860 360 aaKnown RBP3.29□□□□□ -1.88
ITGB1-214ENST00000488427 PRKCEQ02156 737 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 ABRAXAS2Q15018 415 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 P2RY14Q15391 338 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 TIMM50Q3ZCQ8 353 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 RTL6Q6ICC9 239 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 RFWD3Q6PCD5 774 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms