RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 HLCSP50747 726 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 SELENOWP63302 87 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 MS4A2Q01362 244 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 RHDQ02161 417 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 KCNC4Q03721 635 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 TLE3Q04726 772 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 Q0VFX4 171 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 FUT5Q11128 374 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 GPR68Q15743 365 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 MAPK11Q15759 364 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 NNATQ16517 81 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 NTRK2Q16620 822 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 FAM98BQ52LJ0 330 aaKnown RBP10.17□□□□□ -0.78
HDLBP-242ENST00000488013 LRRC23Q53EV4 343 aaPredicted RBP10.17□□□□□ -0.78
HDLBP-242ENST00000488013 CYBRD1Q53TN4 286 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 ZNF311Q5JNZ3 666 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 TMEM81Q6P7N7 255 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 INO80CQ6PI98 192 aaPredicted RBP10.17□□□□□ -0.78
HDLBP-242ENST00000488013 FIGNL1Q6PIW4 674 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 DHRS4L2Q6PKH6 230 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 ISLR2Q6UXK2 745 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 CBLL1Q75N03 491 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 SPATA24Q86W54 205 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 SPPL2CQ8IUH8 684 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 ZNF440Q8IYI8 595 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 FAM13CQ8NE31 585 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 OR4N2Q8NGD1 307 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 THAP3Q8WTV1 239 aaPredicted RBP10.17□□□□□ -0.78
HDLBP-242ENST00000488013 SNRNP27Q8WVK2 155 aaKnown RBP10.17□□□□□ -0.78
HDLBP-242ENST00000488013 PSMF1Q92530 271 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 STMN2Q93045 179 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 OTUB1Q96FW1 271 aaPredicted RBP10.17□□□□□ -0.78
HDLBP-242ENST00000488013 RSRC1Q96IZ7 334 aaKnown RBP10.17□□□□□ -0.78
HDLBP-242ENST00000488013 ADOQ96SZ5 270 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 PINK1Q9BXM7 581 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 HPF1Q9NWY4 346 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 PACSIN3Q9UKS6 424 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 MKLN1Q9UL63 735 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 SLC9A8Q9Y2E8 581 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 DTNAQ9Y4J8 743 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 PCDHGB7Q9Y5F8 929 aa10.17□□□□□ -0.78
HDLBP-242ENST00000488013 DHRS12A0PJE2 317 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 ANKRD33BA6NCL7 494 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 ALG1L2C9J202 215 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 NPIPB9F8W1W9 429 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 PRKNO60260 465 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-242ENST00000488013 NME6O75414 186 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-242ENST00000488013 SNX4O95219 450 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 UTS2O95399 124 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 NADKO95544 446 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-242ENST00000488013 SERPINA1P01009 418 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 ITGB2P05107 769 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 PABPC4LP0CB38 370 aaKnown RBP10.16□□□□□ -0.78
HDLBP-242ENST00000488013 FCGR1AP12314 374 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 RPS4Y1P22090 263 aaKnown RBP10.16□□□□□ -0.78
HDLBP-242ENST00000488013 AQP1P29972 269 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 MSX2P35548 267 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-242ENST00000488013 SOX11P35716 441 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 CHRNB3Q05901 458 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 MFAP5Q13361 173 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 DEFB109BQ30KR1 87 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 ZNF791Q3KP31 576 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-242ENST00000488013 CCNJQ5T5M9 372 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 RNF220Q5VTB9 566 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 RTL4Q6ZR62 310 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 FKBP9P1Q75LS8 142 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 WDR60Q8WVS4 1066 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 GEMIN6Q8WXD5 167 aaKnown RBP10.16□□□□□ -0.78
HDLBP-242ENST00000488013 NR4A3Q92570 626 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 TAMM41Q96BW9 452 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 EFHD2Q96C19 240 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-242ENST00000488013 PYURFQ96I23 114 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 UTP23Q9BRU9 249 aaKnown RBP10.16□□□□□ -0.78
HDLBP-242ENST00000488013 TBL1XR1Q9BZK7 514 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 ZBTB20Q9HC78 741 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-242ENST00000488013 GPR83Q9NYM4 423 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 ANAPC2Q9UJX6 822 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 KCNMB2Q9Y691 235 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 SPTBN4Q9H254 2564 aa10.16□□□□□ -0.78
HDLBP-242ENST00000488013 PTPRBP23467 1997 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 TCRBV3S1A0A5B6 114 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 SERINC4A6NH21 518 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 C3orf80F5H4A9 247 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 GPR37O15354 613 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 FKBP6O75344 327 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 UGT2B17O75795 530 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 CEACAM4O75871 244 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 ZNF682O95780 498 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 CELA2AP08217 269 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 RAP2AP10114 183 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 CYP4B1P13584 511 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 NCK1P16333 377 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 WT1P19544 449 aaPredicted RBP10.15□□□□□ -0.78
HDLBP-242ENST00000488013 EVI2BP34910 448 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 KCNJ5P48544 419 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 KCNJ10P78508 379 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 KPNB1Q14974 876 aaKnown RBP10.15□□□□□ -0.78
HDLBP-242ENST00000488013 IFI44LQ53G44 452 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 KLHL26Q53HC5 615 aa10.15□□□□□ -0.78
HDLBP-242ENST00000488013 RPS26P11Q5JNZ5 115 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms