RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 ARPINQ7Z6K5 226 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 HMGN2P46Q86SG4 172 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 MARCH3Q86UD3 253 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 ZNF619Q8N2I2 560 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 CISD2Q8N5K1 135 aaKnown RBP11.68□□□□□ -0.54
PRDM2-208ENST00000487453 POGLUT1Q8NBL1 392 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 OR8J3Q8NGG0 315 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 OR4C3Q8NH37 302 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 NFKBIDQ8NI38 313 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 TMEM19Q96HH6 336 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 TRNT1Q96Q11 434 aaKnown RBP11.68□□□□□ -0.54
PRDM2-208ENST00000487453 PIF1Q9H611 641 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 RUBCNLQ9H714 662 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 A4GALTQ9NPC4 353 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 POLE3Q9NRF9 147 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 CALML5Q9NZT1 146 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 PPP4R1LQ9P1A2 415 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 L3MBTL1Q9Y468 752 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 GMEB1Q9Y692 573 aa11.68□□□□□ -0.54
PRDM2-208ENST00000487453 PRAMEF27A3QJZ7 478 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 TFECO14948 347 aaPredicted RBP11.67□□□□□ -0.54
PRDM2-208ENST00000487453 NDUFB5O43674 189 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 GMFGO60234 142 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 FADS1O60427 444 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 TNFRSF21O75509 655 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 ANGPTL1O95841 491 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 CRYABP02511 175 aaKnown RBP11.67□□□□□ -0.54
PRDM2-208ENST00000487453 TFPTP0C1Z6 253 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 BMP2P12643 396 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 TBXA2RP21731 343 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 PTGDSP41222 190 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 CHRNEQ04844 493 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 KRT72Q14CN4 511 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 INPP5JQ15735 1006 aaPredicted RBP11.67□□□□□ -0.54
PRDM2-208ENST00000487453 PDZK1Q5T2W1 519 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 TYW3Q6IPR3 259 aaKnown RBP11.67□□□□□ -0.54
PRDM2-208ENST00000487453 FRRS1Q6ZNA5 592 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 ZFP62Q8NB50 900 aaPredicted RBP11.67□□□□□ -0.54
PRDM2-208ENST00000487453 OR1J4Q8NGS1 313 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 OR10A6Q8NH74 314 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 SLC38A5Q8WUX1 472 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 SNRNP40Q96DI7 357 aaKnown RBP11.67□□□□□ -0.54
PRDM2-208ENST00000487453 TMEM41AQ96HV5 264 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 TAAR6Q96RI8 345 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 ECSITQ9BQ95 431 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 TTTY12Q9BZ98 90 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 HOXD1Q9GZZ0 328 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 QRSL1Q9H0R6 528 aaKnown RBP11.67□□□□□ -0.54
PRDM2-208ENST00000487453 TSPAN10Q9H1Z9 355 aaPredicted RBP11.67□□□□□ -0.54
PRDM2-208ENST00000487453 SLC38A1Q9H2H9 487 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 KAT8Q9H7Z6 458 aaKnown RBP11.67□□□□□ -0.54
PRDM2-208ENST00000487453 CACYBPQ9HB71 228 aaKnown RBP11.67□□□□□ -0.54
PRDM2-208ENST00000487453 PROK2Q9HC23 129 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 SDHAF3Q9NRP4 125 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 B4GALT7Q9UBV7 327 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 NTNG1Q9Y2I2 539 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 CACNA1BQ00975 2339 aa11.67□□□□□ -0.54
PRDM2-208ENST00000487453 IGSF10Q6WRI0 2623 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 CENPVL1A0A0U1RR11 272 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 LRRC3CA6NJW4 275 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 C17orf51A8MQB3 221 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 H3BNH8 94 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 TRIM3O75382 744 aaPredicted RBP11.66□□□□□ -0.54
PRDM2-208ENST00000487453 UGT2B17O75795 530 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 ZIC2O95409 532 aaPredicted RBP11.66□□□□□ -0.54
PRDM2-208ENST00000487453 NGFRP08138 427 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 ARAFP10398 606 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 SLC6A2P23975 617 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 ELAVL4P26378 380 aaKnown RBP11.66□□□□□ -0.54
PRDM2-208ENST00000487453 GDF1P27539 372 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 MNAT1P51948 309 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 SLC7A2P52569 658 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 ATP12AP54707 1039 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 MLLT10P55197 1068 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 PPIAP62937 165 aaKnown RBP11.66□□□□□ -0.54
PRDM2-208ENST00000487453 CDK6Q00534 326 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 ALDH6A1Q02252 535 aaKnown RBP11.66□□□□□ -0.54
PRDM2-208ENST00000487453 SCARB2Q14108 478 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 TOMM20Q15388 145 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 ZNF630Q2M218 657 aaPredicted RBP11.66□□□□□ -0.54
PRDM2-208ENST00000487453 OR5M10Q6IEU7 315 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 HACD2Q6Y1H2 254 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 LRRC74BQ6ZQY2 392 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 SERPINA11Q86U17 422 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 SLC22A16Q86VW1 577 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 ZNF843Q8N446 348 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 TMCO5AQ8N6Q1 288 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 C11orf65Q8NCR3 313 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 BBS10Q8TAM1 723 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 PHOSPHO1Q8TCT1 267 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 RNF138Q8WVD3 245 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 HOPXQ9BPY8 73 aaPredicted RBP11.66□□□□□ -0.54
PRDM2-208ENST00000487453 TREX2Q9BQ50 279 aaPredicted RBP11.66□□□□□ -0.54
PRDM2-208ENST00000487453 RTN4RQ9BZR6 473 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 TMEM38AQ9H6F2 299 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 ZNF703Q9H7S9 590 aaPredicted RBP11.66□□□□□ -0.54
PRDM2-208ENST00000487453 ZFP64Q9NPA5 681 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 AGPAT4Q9NRZ5 378 aa11.66□□□□□ -0.54
PRDM2-208ENST00000487453 OLAHQ9NV23 265 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms