RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 RNF165Q6ZSG1 346 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 EXOC3L1Q86VI1 746 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 OR2W6PQ8NHA6 318 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 FIG4Q92562 907 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 MBD6Q96DN6 1003 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 STARD4Q96DR4 205 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 MTERF3Q96E29 417 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 PGM2Q96G03 612 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 APOPT1Q96IL0 206 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 FCRL1Q96LA6 429 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 FAM111AQ96PZ2 611 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 ALPK1Q96QP1 1244 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 SLC39A3Q9BRY0 314 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 TMUB1Q9BVT8 246 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 PINK1Q9BXM7 581 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 TUBB1Q9H4B7 451 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 ACSS1Q9NUB1 689 aaPredicted RBP11.23□□□□□ -0.61
SREBF1-215ENST00000487401 ZNF175Q9Y473 711 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 DNAJC15Q9Y5T4 150 aa11.23□□□□□ -0.61
SREBF1-215ENST00000487401 A0A087WZY1 265 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 IGLV3-32A0A0A0MS00 114 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 TMEM114B3SHH9 223 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 H0YC42 278 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 LSM1O15116 133 aaKnown RBP11.22□□□□□ -0.61
SREBF1-215ENST00000487401 NDUFB5O43674 189 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 ANKRD17O75179 2603 aaKnown RBP11.22□□□□□ -0.61
SREBF1-215ENST00000487401 ATE1O95260 518 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 HRGP04196 525 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 CHRNGP07510 517 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 FGF4P08620 206 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 BCKDHAP12694 445 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 KLK2P20151 261 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 MAPK1P28482 360 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 HPCAL1P37235 193 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 KCNJ5P48544 419 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 PRIM2P49643 509 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 SUCLG1P53597 346 aaKnown RBP11.22□□□□□ -0.61
SREBF1-215ENST00000487401 TPD52P55327 224 aaPredicted RBP11.22□□□□□ -0.61
SREBF1-215ENST00000487401 CLDN15P56746 228 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 CLDN20P56880 219 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 SIRPAP78324 504 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 FAM27E3Q08E93 113 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 PDE7AQ13946 482 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 PPP4R4Q6NUP7 873 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 VWA1Q6PCB0 445 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 ZCCHC12Q6PEW1 402 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 LRIG3Q6UXM1 1119 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 APOOLQ6UXV4 268 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 BTLAQ7Z6A9 289 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 GALNT10Q86SR1 603 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 RIBC1Q8N443 379 aaPredicted RBP11.22□□□□□ -0.61
SREBF1-215ENST00000487401 BANPQ8N9N5 519 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 OR6Y1Q8NGX8 325 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 FBXO30Q8TB52 745 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 TWIST2Q8WVJ9 160 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 CHMP6Q96FZ7 201 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 ZNF845Q96IR2 970 aaPredicted RBP11.22□□□□□ -0.61
SREBF1-215ENST00000487401 PPP3R2Q96LZ3 170 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 MS4A4EQ96PG1 132 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 PRRG4Q9BZD6 226 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 PLEKHF2Q9H8W4 249 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 L2HGDHQ9H9P8 463 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 MKS1Q9NXB0 559 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 NTMQ9P121 344 aa11.22□□□□□ -0.61
SREBF1-215ENST00000487401 DNAJC13O75165 2243 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 TMEM233B4DJY2 109 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 SHISA8B8ZZ34 492 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 ALG1L2C9J202 215 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 SCDO00767 359 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 PIP5K1BO14986 540 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 DIAPH2O60879 1101 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 PEX11AO75192 247 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 SPAG7O75391 227 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 KCNK2O95069 426 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 OXSR1O95747 527 aaPredicted RBP11.21□□□□□ -0.61
SREBF1-215ENST00000487401 NGFRP08138 427 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 ACP2P11117 423 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 POU2F1P14859 743 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 EFNA1P20827 205 aaPredicted RBP11.21□□□□□ -0.61
SREBF1-215ENST00000487401 TBXA2RP21731 343 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 LCN1P31025 176 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 RPL3P39023 403 aaKnown RBP11.21□□□□□ -0.61
SREBF1-215ENST00000487401 CD79BP40259 229 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 MAP3K8P41279 467 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 KIR2DL2P43627 348 aaPredicted RBP11.21□□□□□ -0.61
SREBF1-215ENST00000487401 SERPINB4P48594 390 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 OCRLQ01968 901 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 PON3Q15166 354 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.21□□□□□ -0.61
SREBF1-215ENST00000487401 DEFB113Q30KQ7 82 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 MFSD12Q6NUT3 480 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 FIGNL1Q6PIW4 674 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 TRABD2AQ86V40 505 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 WDR75Q8IWA0 830 aaKnown RBP11.21□□□□□ -0.61
SREBF1-215ENST00000487401 COX18Q8N8Q8 333 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 GATSQ8NAP1 163 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 SLC16A11Q8NCK7 471 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 OR4C3Q8NH37 302 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 FNDC9Q8TBE3 224 aa11.21□□□□□ -0.61
SREBF1-215ENST00000487401 AGR3Q8TD06 166 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms