RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ZNF655Q8N720 491 aaPredicted RBP24.35■■□□□ 1.49
HLA-C-208ENST00000487245 OR6F1Q8NGZ6 308 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 ZCCHC10Q8TBK6 192 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 FAM46AQ96IP4 442 aaKnown RBP24.35■■□□□ 1.49
HLA-C-208ENST00000487245 ZFYVE21Q9BQ24 234 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 SYNDIG1Q9H7V2 258 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 ANKRA2Q9H9E1 313 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 SPACA6W5XKT8 324 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 TRANK1O15050 2925 aa24.35■■□□□ 1.49
HLA-C-208ENST00000487245 CPSF4LA6NMK7 179 aaKnown RBP24.34■■□□□ 1.49
HLA-C-208ENST00000487245 SURF4O15260 269 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 TNFP01375 233 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 TRHRP34981 398 aaPredicted RBP24.34■■□□□ 1.49
HLA-C-208ENST00000487245 TGM4P49221 684 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 PDX1P52945 283 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 RGS8P57771 180 aaPredicted RBP24.34■■□□□ 1.49
HLA-C-208ENST00000487245 MXD1Q05195 221 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 GPR18Q14330 331 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 DEFB134Q4QY38 66 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 RERGQ96A58 199 aaPredicted RBP24.34■■□□□ 1.49
HLA-C-208ENST00000487245 COL26A1Q96A83 441 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 ZG16BQ96DA0 208 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 C1GALT1C1Q96EU7 318 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 KATNB1Q9BVA0 655 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 PRR14Q9BWN1 585 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 TPK1Q9H3S4 243 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 A0A1W2PQ09 198 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 A0A1W2PQL4 384 aaPredicted RBP24.34■■□□□ 1.49
HLA-C-208ENST00000487245 C2orf74A8MZ97 194 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 P2RX6O15547 441 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 ZIC2O95409 532 aaPredicted RBP24.34■■□□□ 1.49
HLA-C-208ENST00000487245 CPMP14384 443 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 SDC2P34741 201 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 SLC1A3P43003 542 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 CRTC2Q53ET0 693 aaPredicted RBP24.34■■□□□ 1.49
HLA-C-208ENST00000487245 EIPR1Q53HC9 387 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 ZNF628Q5EBL2 1059 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 RSBN1Q5VWQ0 802 aaPredicted RBP24.34■■□□□ 1.49
HLA-C-208ENST00000487245 FAM111BQ6SJ93 734 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 FAM131AQ6UXB0 335 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 FRRS1Q6ZNA5 592 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 MBOAT2Q6ZWT7 520 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 OR4Q3Q8NH05 313 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 OR10G6Q8NH81 332 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 GATAD2BQ8WXI9 593 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 NECTIN4Q96NY8 510 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 NEK6Q9HC98 313 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 POT1Q9NUX5 634 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 CNIH4Q9P003 139 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 ZNF221Q9UK13 617 aa24.34■■□□□ 1.49
HLA-C-208ENST00000487245 ZNF443Q9Y2A4 671 aaPredicted RBP24.34■■□□□ 1.49
HLA-C-208ENST00000487245 IGHA1P01876 353 aa24.33■■□□□ 1.49
HLA-C-208ENST00000487245 CDH11P55287 796 aa24.33■■□□□ 1.49
HLA-C-208ENST00000487245 DSG2Q14126 1118 aa24.33■■□□□ 1.49
HLA-C-208ENST00000487245 PUS10Q3MIT2 529 aaKnown RBP24.33■■□□□ 1.49
HLA-C-208ENST00000487245 PLEKHM3Q6ZWE6 761 aa24.33■■□□□ 1.49
HLA-C-208ENST00000487245 SLC16A11Q8NCK7 471 aa24.33■■□□□ 1.49
HLA-C-208ENST00000487245 CDS1Q92903 461 aa24.33■■□□□ 1.49
HLA-C-208ENST00000487245 TMEM203Q969S6 136 aa24.33■■□□□ 1.49
HLA-C-208ENST00000487245 NEDD4LQ96PU5 975 aa24.33■■□□□ 1.49
HLA-C-208ENST00000487245 MCHR1Q99705 422 aa24.33■■□□□ 1.49
HLA-C-208ENST00000487245 SLC22A4Q9H015 551 aa24.33■■□□□ 1.49
HLA-C-208ENST00000487245 GPR52Q9Y2T5 361 aa24.33■■□□□ 1.49
HLA-C-208ENST00000487245 YARS2Q9Y2Z4 477 aaKnown RBP24.33■■□□□ 1.49
HLA-C-208ENST00000487245 WDR45Q9Y484 360 aa24.33■■□□□ 1.49
HLA-C-208ENST00000487245 FABP12A6NFH5 140 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 RGS13O14921 159 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 POLR1CO15160 346 aaPredicted RBP24.32■■□□□ 1.48
HLA-C-208ENST00000487245 FRS3O43559 492 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 KRT8P05787 483 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 IFI6P09912 130 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 RABIFP47224 123 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 PGGHGQ32M88 737 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 TMEM92Q6UXU6 159 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 Q6ZSR6 202 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 DGLUCYQ7Z3D6 616 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 GDF7Q7Z4P5 450 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 MEX3DQ86XN8 651 aaKnown RBP24.32■■□□□ 1.48
HLA-C-208ENST00000487245 OR52N1Q8NH53 320 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 CD93Q9NPY3 652 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 C19orf53Q9UNZ5 99 aaPredicted RBP24.32■■□□□ 1.48
HLA-C-208ENST00000487245 OR5K4A6NMS3 321 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 FCMRO60667 390 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 HMGN1P05114 100 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 THBS1P07996 1170 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 GNSP15586 552 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 DDOSTP39656 456 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 AVPR1BP47901 424 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 SIM1P81133 766 aaPredicted RBP24.32■■□□□ 1.48
HLA-C-208ENST00000487245 FABP5Q01469 135 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 MAP4K2Q12851 820 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 NDUFA5Q16718 116 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 ZNF620Q6ZNG0 422 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 GPBAR1Q8TDU6 330 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 SLC41A3Q96GZ6 507 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 ZNF649Q9BS31 505 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 PIGUQ9H490 435 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 C6orf106Q9H6K1 298 aaPredicted RBP24.32■■□□□ 1.48
HLA-C-208ENST00000487245 TMEM165Q9HC07 324 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 KRCC1Q9NPI7 259 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms