RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 KRCC1Q9NPI7 259 aaPredicted RBP16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 SLC7A7Q9UM01 511 aa16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 MRPS2Q9Y399 296 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-207ENST00000486828 ZNF860A6NHJ4 632 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 H0YGG7 62 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 PLD2O14939 933 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 RGS5O15539 181 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 CDRT1O95170 752 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 LIMS3P0CW19 117 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 LIMS4P0CW20 117 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 RPS4Y1P22090 263 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 ARF3P61204 181 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 COPZ1P61923 177 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 PSPHP78330 225 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 ID2Q02363 134 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 ILF3Q12906 894 aaKnown RBP eCLIP16.75■□□□□ 0.273e-6■■□□□ 11.7
PDLIM7-207ENST00000486828 CCNJQ5T5M9 372 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 ZNF619Q8N2I2 560 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 CLDN22Q8N7P3 220 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 GATAD2BQ8WXI9 593 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 FAM3CQ92520 227 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 MIR1-1HGQ9H1L0 117 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 ERVK13-1Q9NX77 482 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 SF3B6Q9Y3B4 125 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 ENTPD2Q9Y5L3 495 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 CDH10Q9Y6N8 788 aa16.75■□□□□ 0.27
PDLIM7-207ENST00000486828 A0A087WV62 115 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 CENPVL1A0A0U1RR11 272 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 SLC35F4A4IF30 521 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 C2orf74A8MZ97 194 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 CH25HO95992 272 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 ATP1B1P05026 303 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 TFF2Q03403 129 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 GPR68Q15743 365 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 TMEM31Q5JXX7 168 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 DESI1Q6ICB0 168 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 TMEM92Q6UXU6 159 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 SHFQ7M4L6 423 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 RANBP3LQ86VV4 465 aaPredicted RBP16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 BAHD1Q8TBE0 780 aaPredicted RBP16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 GPR151Q8TDV0 419 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 UFD1Q92890 307 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 TMEM203Q969S6 136 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 MSLNLQ96KJ4 702 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 ARHGAP9Q9BRR9 750 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 ADAP2Q9NPF8 381 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 POT1Q9NUX5 634 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 EVA1BQ9NVM1 165 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 SATB2Q9UPW6 733 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 PIAS3Q9Y6X2 628 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 V9GYH0 126 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 SPACA6W5XKT8 324 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 FAM221BA6H8Z2 402 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 EIF2S1P05198 315 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 DBIP07108 87 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 LSSP48449 732 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 RPS25P62851 125 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 DCST2Q5T1A1 773 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 C22orf42Q6IC83 251 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 TMPRSS11AQ6ZMR5 421 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 Q6ZSR6 202 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 RNF44Q7L0R7 432 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 GDPD3Q7L5L3 318 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 PRSS41Q7RTY9 318 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 GALNT12Q8IXK2 581 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 ZNF485Q8NCK3 441 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 TXNDC15Q96J42 360 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 MED18Q9BUE0 208 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 IL21RQ9HBE5 538 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 DUSP22Q9NRW4 184 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 CMAHPQ9Y471 501 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 FANCMQ8IYD8 2048 aa16.74■□□□□ 0.27
PDLIM7-207ENST00000486828 LRP4O75096 1905 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 TRAPPC13A5PLN9 417 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 SLC30A4O14863 429 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 FGF17O60258 216 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 PLOD3O60568 738 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 LDB3O75112 727 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 STX11O75558 287 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 APOA1P02647 267 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 HMGN1P05114 100 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 MSL3P1P0C860 447 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 PVRP15151 417 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 SLC1A3P43003 542 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 MXD1Q05195 221 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 CCDC85BQ15834 202 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 MAPK14Q16539 360 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 QSOX2Q6ZRP7 698 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 LAX1Q8IWV1 398 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 TMEFF1Q8IYR6 380 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 ZNF655Q8N720 491 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 CDRT4Q8N9R6 151 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 OR2T33Q8NG76 320 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 PATE1Q8WXA2 126 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 KCTD7Q96MP8 289 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 STACQ99469 402 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 PRSS27Q9BQR3 290 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 TPK1Q9H3S4 243 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 SACM1LQ9NTJ5 587 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 C14orf119Q9NWQ9 140 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms