RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 KLHL14Q9P2G3 628 aa11.79□□□□□ -0.52
SSR4-211ENST00000486204 PCDHGB4Q9UN71 923 aa11.79□□□□□ -0.52
SSR4-211ENST00000486204 NPIPA1Q9UND3 350 aa11.79□□□□□ -0.52
SSR4-211ENST00000486204 KCNE3Q9Y6H6 103 aa11.79□□□□□ -0.52
SSR4-211ENST00000486204 ZNF469Q96JG9 3925 aaPredicted RBP11.79□□□□□ -0.52
SSR4-211ENST00000486204 ANKHD1Q8IWZ3 2542 aaKnown RBP11.79□□□□□ -0.52
SSR4-211ENST00000486204 FAM221AA4D161 298 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 CCDC154A6NI56 674 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 NR5A2O00482 541 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 TFECO14948 347 aaPredicted RBP11.78□□□□□ -0.52
SSR4-211ENST00000486204 UNC5CO95185 931 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 SNX4O95219 450 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 KCNH1O95259 989 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 GSNP06396 782 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 CELA3AP09093 270 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 KRT20P35900 424 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 GYS2P54840 703 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 RPP38P78345 283 aaKnown RBP11.78□□□□□ -0.52
SSR4-211ENST00000486204 SF3A3Q12874 501 aaKnown RBP eCLIP11.78□□□□□ -0.521e-16■□□□□ 8.2
SSR4-211ENST00000486204 SNTA1Q13424 505 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.78□□□□□ -0.52
SSR4-211ENST00000486204 GTDC1Q4AE62 458 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 CCNJQ5T5M9 372 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 METTL21CQ5VZV1 264 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 SLC30A6Q6NXT4 461 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 BHLHB9Q6PI77 547 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 FIGNL1Q6PIW4 674 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 SLC2A7Q6PXP3 512 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 DNAJC14Q6Y2X3 702 aaPredicted RBP11.78□□□□□ -0.52
SSR4-211ENST00000486204 FGD2Q7Z6J4 655 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 GALNT10Q86SR1 603 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 FAM109AQ8N4B1 249 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 COX18Q8N8Q8 333 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 C10orf82Q8WW14 230 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 GTF2H4Q92759 462 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 TMCO6Q96DC7 493 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 TMEM41AQ96HV5 264 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 ZNF597Q96LX8 424 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 SPOCK3Q9BQ16 436 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 SLC35A5Q9BS91 424 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 BTBD2Q9BX70 525 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 UBQLN3Q9H347 655 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 METTL7AQ9H8H3 244 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 ZFP64Q9NPA5 681 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 SEC14L3Q9UDX4 400 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 BOKQ9UMX3 212 aaPredicted RBP11.78□□□□□ -0.52
SSR4-211ENST00000486204 FAF1Q9UNN5 650 aaPredicted RBP11.78□□□□□ -0.52
SSR4-211ENST00000486204 WIF1Q9Y5W5 379 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 LIPGQ9Y5X9 500 aa11.78□□□□□ -0.52
SSR4-211ENST00000486204 C17orf51A8MQB3 221 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 ACOT7O00154 380 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 SNPHO15079 494 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 ASNA1O43681 348 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 KRT16P08779 473 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 ZCCHC18P0CG32 403 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 NCF2P19878 526 aaPredicted RBP11.77□□□□□ -0.53
SSR4-211ENST00000486204 EVI2BP34910 448 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 CA7P43166 264 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 MAGEA5P43359 124 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 RFX3P48380 749 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 ARFIP2P53365 341 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 MVDP53602 400 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 SEC24CP53992 1094 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 CASP9P55211 416 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 PPIAP62937 165 aaKnown RBP11.77□□□□□ -0.53
SSR4-211ENST00000486204 POU6F2P78424 691 aaPredicted RBP11.77□□□□□ -0.53
SSR4-211ENST00000486204 HSF1Q00613 529 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 PLGLB1Q02325 96 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 GRAMD1BQ3KR37 738 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 AGKQ53H12 422 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 APOOLQ6UXV4 268 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 SLC22A16Q86VW1 577 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 ADAMTS15Q8TE58 950 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 ZFP90Q8TF47 636 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 SPDL1Q96EA4 605 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 CHMP6Q96FZ7 201 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 PAIP1Q9H074 479 aaKnown RBP11.77□□□□□ -0.53
SSR4-211ENST00000486204 OR51I1Q9H343 314 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 GSX1Q9H4S2 264 aaPredicted RBP11.77□□□□□ -0.53
SSR4-211ENST00000486204 FAM53CQ9NYF3 392 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 KLRF1Q9NZS2 232 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 SH3BGRL2Q9UJC5 107 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 MRTO4Q9UKD2 239 aaKnown RBP11.77□□□□□ -0.53
SSR4-211ENST00000486204 TRIM33Q9UPN9 1127 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 C15orf41Q9Y2V0 281 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 MPDZO75970 2070 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 DOCK7Q96N67 2140 aa11.77□□□□□ -0.53
SSR4-211ENST00000486204 TRBV5-3A0A0A0MS03 114 aa11.76□□□□□ -0.53
SSR4-211ENST00000486204 C2orf72A6NCS6 295 aa11.76□□□□□ -0.53
SSR4-211ENST00000486204 RFXANKO14593 260 aa11.76□□□□□ -0.53
SSR4-211ENST00000486204 ZNHIT1O43257 154 aa11.76□□□□□ -0.53
SSR4-211ENST00000486204 UTS2O95399 124 aa11.76□□□□□ -0.53
SSR4-211ENST00000486204 OXSR1O95747 527 aaPredicted RBP11.76□□□□□ -0.53
SSR4-211ENST00000486204 IGHG3P01860 377 aa11.76□□□□□ -0.53
SSR4-211ENST00000486204 NGFRP08138 427 aa11.76□□□□□ -0.53
SSR4-211ENST00000486204 AGAP20933 346 aa11.76□□□□□ -0.53
SSR4-211ENST00000486204 MATN1P21941 496 aa11.76□□□□□ -0.53
SSR4-211ENST00000486204 LSP1P33241 339 aa11.76□□□□□ -0.53
SSR4-211ENST00000486204 PSMD4P55036 377 aaKnown RBP11.76□□□□□ -0.53
SSR4-211ENST00000486204 FUT5Q11128 374 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms