RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 HSPB2A8KAH6 182 aa17.72■□□□□ 0.43
SNX5-213ENST00000486039 ANGPTL1O95841 491 aa17.72■□□□□ 0.43
SNX5-213ENST00000486039 CCT3P49368 545 aaKnown RBP17.72■□□□□ 0.43
SNX5-213ENST00000486039 CLK3P49761 638 aaKnown RBP17.72■□□□□ 0.43
SNX5-213ENST00000486039 LHX2P50458 406 aa17.72■□□□□ 0.43
SNX5-213ENST00000486039 B3GALT5-AS1P59052 145 aa17.72■□□□□ 0.43
SNX5-213ENST00000486039 SF3B4Q15427 424 aaKnown RBP eCLIP17.72■□□□□ 0.433e-7■□□□□ 11.3
SNX5-213ENST00000486039 HSPB2Q16082 182 aa17.72■□□□□ 0.43
SNX5-213ENST00000486039 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNX5-213ENST00000486039 LSM12Q3MHD2 195 aaKnown RBP17.72■□□□□ 0.43
SNX5-213ENST00000486039 ENPP6Q6UWR7 440 aa17.72■□□□□ 0.43
SNX5-213ENST00000486039 OR4C3Q8NH37 302 aa17.72■□□□□ 0.43
SNX5-213ENST00000486039 JADE3Q92613 823 aa17.72■□□□□ 0.43
SNX5-213ENST00000486039 DTNBP1Q96EV8 351 aa17.72■□□□□ 0.43
SNX5-213ENST00000486039 SFXN2Q96NB2 322 aa17.72■□□□□ 0.43
SNX5-213ENST00000486039 GPATCH2Q9NW75 528 aa17.72■□□□□ 0.43
SNX5-213ENST00000486039 CSMD2Q7Z408 3487 aa17.72■□□□□ 0.43
SNX5-213ENST00000486039 AKAP9Q99996 3911 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 ANKRD28O15084 1053 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 SNNO75324 88 aaPredicted RBP17.71■□□□□ 0.43
SNX5-213ENST00000486039 OXSR1O95747 527 aaPredicted RBP17.71■□□□□ 0.43
SNX5-213ENST00000486039 LBPP18428 481 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 CHMP24386 653 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 CLDN18P56856 261 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 HBA1P69905 142 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 SRYQ05066 204 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 TP53BP2Q13625 1128 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 CASP8Q14790 479 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 PGS1Q32NB8 556 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 CCNJQ5T5M9 372 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 OR4F3Q6IEY1 312 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 AAGABQ6PD74 315 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 POMZP3Q6PJE2 187 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 ADGRE4PQ86SQ3 457 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 LRRC34Q8IZ02 419 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 COX18Q8N8Q8 333 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 OR56A1Q8NGH5 318 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 CDS1Q92903 461 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 STACQ99469 402 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 TUBA1CQ9BQE3 449 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 G6PC3Q9BUM1 346 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 TBL1XR1Q9BZK7 514 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 PIGUQ9H490 435 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 CALHM2Q9HA72 323 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 NEUROD4Q9HD90 331 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 DUSP22Q9NRW4 184 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 THAP1Q9NVV9 213 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 GIN1Q9NXP7 522 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 MED12Q93074 2177 aa17.71■□□□□ 0.43
SNX5-213ENST00000486039 TACC2O95359 2948 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 ARHGAP21Q5T5U3 1957 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 KIAA1549Q9HCM3 1950 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 IGLV3-32A0A0A0MS00 114 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 MBD3L4A6NDZ8 208 aaPredicted RBP17.7■□□□□ 0.42
SNX5-213ENST00000486039 MBD3L3A6NE82 208 aaPredicted RBP17.7■□□□□ 0.42
SNX5-213ENST00000486039 MBD3L5A6NJ08 208 aaPredicted RBP17.7■□□□□ 0.42
SNX5-213ENST00000486039 ALG1L2C9J202 215 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 CFLARO15519 480 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 NGFRP08138 427 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 HK1P19367 917 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 TBXA2RP21731 343 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 ZNF136P52737 540 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 KRTAP10-9P60411 292 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 POU6F2P78424 691 aaPredicted RBP17.7■□□□□ 0.42
SNX5-213ENST00000486039 C17orf67Q0P5P2 114 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 SLC25A35Q3KQZ1 300 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 CDC73Q6P1J9 531 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 CLECL1Q8IZS7 167 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 RELL2Q8NC24 303 aaPredicted RBP17.7■□□□□ 0.42
SNX5-213ENST00000486039 OR5AK3PQ8NH89 298 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 MBD3L2Q8NHZ7 208 aaPredicted RBP17.7■□□□□ 0.42
SNX5-213ENST00000486039 SFXN5Q8TD22 340 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 BTBD2Q9BX70 525 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 ACTRT3Q9BYD9 372 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 DPY30Q9C005 99 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 KCNE3Q9Y6H6 103 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 ADGRG4Q8IZF6 3080 aa17.7■□□□□ 0.42
SNX5-213ENST00000486039 HCFC1P51610 2035 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 H0Y3Z8 333 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 SDHDO14521 159 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 SCN2BO60939 215 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 IL2RAP01589 272 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 ZNF708P17019 499 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 CAPN3P20807 821 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 BMP5P22003 454 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 PHC1P78364 1004 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 TLE4Q04727 773 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 RCAN2Q14206 197 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 GANABQ14697 944 aaKnown RBP17.69■□□□□ 0.42
SNX5-213ENST00000486039 SPDYE7PQ495Y7 208 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 OGFOD2Q6N063 350 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 PLXDC2Q6UX71 529 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 DMRTC2Q8IXT2 367 aaPredicted RBP17.69■□□□□ 0.42
SNX5-213ENST00000486039 C9orf106Q8NAJ2 232 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 OR8J2Q8NGG1 315 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 ARL8AQ96BM9 186 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 C1GALT1C1Q96EU7 318 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 CHMP6Q96FZ7 201 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 PTGES2Q9H7Z7 377 aa17.69■□□□□ 0.42
SNX5-213ENST00000486039 MANSC1Q9H8J5 431 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms