RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 UTP20O75691 2785 aaKnown RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 MYOCOSA0A1B0GUC4 107 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 BLACEA4D250 179 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 DPPA5A6NC42 116 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 A6NHS1 94 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 MKRN2OSH3BPM6 223 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 TNFRSF11BO00300 401 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 HMGN4O00479 90 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 SIAH2O43255 324 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ASNA1O43681 348 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 GALR3O60755 368 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 UGT2B11O75310 529 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 CLPTM1O96005 669 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 HMGN2P05204 90 aaKnown RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 TFPTP0C1Z6 253 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ZGLP1P0C6A0 271 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 C8orf89P0DMQ9 161 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 OR12D1P0DN82 309 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 PORP16435 677 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 AVPR1BP47901 424 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 PCBP3P57721 371 aaKnown RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 SMIM11AP58511 58 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ADARB1P78563 741 aaKnown RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 VLDLRP98155 873 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 IL1RL1Q01638 556 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 SPIBQ01892 262 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 TLE1Q04724 770 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 IL18R1Q13478 541 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 LASP1Q14847 261 aaKnown RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ZIK1Q3SY52 487 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 MINDY4Q4G0A6 757 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 KCTD21Q4G0X4 260 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 GPAT3Q53EU6 434 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 DCAF10Q5QP82 559 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 GARNL3Q5VVW2 1013 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 PRAMEF8Q5VWM4 474 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 PRAMEF7Q5VXH5 474 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 TBPL2Q6SJ96 375 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 KIRREL2Q6UWL6 708 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ASB18Q6ZVZ8 466 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 RAB43Q86YS6 212 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 C8orf59Q8N0T1 100 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 TAGAPQ8N103 731 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ATG16L2Q8NAA4 619 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 LSM14AQ8ND56 463 aaKnown RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 SETD9Q8NE22 299 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 OR9A2Q8NGT5 310 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 SUN3Q8TAQ9 357 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 MIPOL1Q8TD10 442 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ADAMTS15Q8TE58 950 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 RAB8BQ92930 207 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 TSLPQ969D9 159 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 UCN3Q969E3 161 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 TAMM41Q96BW9 452 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ELP4Q96EB1 424 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 PEX11GQ96HA9 241 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ZNF681Q96N22 645 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 MS4A4EQ96PG1 132 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ZNF300Q96RE9 604 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 BTBD2Q9BX70 525 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ACTRT3Q9BYD9 372 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 TOR3AQ9H497 397 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 CLK4Q9HAZ1 481 aaKnown RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ZNF160Q9HCG1 818 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 GPR83Q9NYM4 423 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 PDP1Q9P0J1 537 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 KCMF1Q9P0J7 381 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 PTGFRNQ9P2B2 879 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ENOPH1Q9UHY7 261 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 ABCG2Q9UNQ0 655 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 SH3GLB1Q9Y371 365 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 NAALAD2Q9Y3Q0 740 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 HEMK1Q9Y5R4 338 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-216ENST00000484087 FLNCQ14315 2725 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 SHANK1Q9Y566 2161 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 MYO18BQ8IUG5 2567 aa6.43□□□□□ -1.38
BRCA1-216ENST00000484087 A0A0G2JPF8 293 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 VSTM2BA6NLU5 285 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 HNRNPCL2B2RXH8 293 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 IDSB3KWA1 339 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 HNRNPCL3B7ZW38 293 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 PLOD2O00469 737 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 DLGAP1O14490 977 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 CLDN4O14493 209 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 SEC24DO94855 1032 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-216ENST00000484087 SOX30O94993 753 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 GPR75O95800 540 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 IFI6P09912 130 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 HNRNPCL4P0DMR1 293 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 COX6A1P12074 109 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 RNH1P13489 461 aaKnown RBP6.42□□□□□ -1.38
BRCA1-216ENST00000484087 ANXA8P13928 327 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 CPMP14384 443 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 ETS2P15036 469 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 RHCEP18577 417 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 NT5EP21589 574 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 ITGA3P26006 1051 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 RRM2P31350 389 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 IFNA8P32881 189 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 MC3RP41968 323 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms