RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 TRAPPC2P0DI81 140 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 TRAPPC2BP0DI82 140 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 GAAP10253 952 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 NR2F6P10588 404 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 ACP2P11117 423 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 CKMT1AP12532 417 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 CSNK2A2P19784 350 aaPredicted RBP7.6□□□□□ -1.19
SORT1-205ENST00000483508 MMP11P24347 488 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 PSMB5P28074 263 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 GTF2E2P29084 291 aaKnown RBP7.6□□□□□ -1.19
SORT1-205ENST00000483508 TNFSF8P32971 234 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 CASP3P42574 277 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 CRYBB2P43320 205 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 RABIFP47224 123 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 SEPHS1P49903 392 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 CLCNKAP51800 687 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 NCBP2P52298 156 aaKnown RBP eCLIP7.6□□□□□ -1.19
SORT1-205ENST00000483508 WNT4P56705 351 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 PSPHP78330 225 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 EFNB1P98172 346 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 CFHR1Q03591 330 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 SELENBP1Q13228 472 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 GINS1Q14691 196 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 TRAM2Q15035 370 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 NDUFA5Q16718 116 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 WSCD2Q2TBF2 565 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 MINDY4Q4G0A6 757 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 SYT14P1Q58G82 188 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 ARHGAP40Q5TG30 622 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 DESI1Q6ICB0 168 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 ZNF544Q6NX49 715 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 CCBE1Q6UXH8 406 aaPredicted RBP7.6□□□□□ -1.19
SORT1-205ENST00000483508 HSDL2Q6YN16 418 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 TMPRSS11AQ6ZMR5 421 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 ADCK2Q7Z695 626 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 PHC2Q8IXK0 858 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 C2orf73Q8N5S3 287 aaPredicted RBP7.6□□□□□ -1.19
SORT1-205ENST00000483508 TMEM145Q8NBT3 493 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 MORN4Q8NDC4 146 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 TOR1AIP2Q8NFQ8 470 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 OR52I1Q8NGK6 324 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 TMEM163Q8TC26 289 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 IFI44Q8TCB0 444 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 SLC7A13Q8TCU3 470 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 XAGE5Q8WWM1 108 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 AP3S1Q92572 193 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 FAM131CQ96AQ9 280 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 C12orf66Q96MD2 445 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 ZNF582Q96NG8 517 aaPredicted RBP7.6□□□□□ -1.19
SORT1-205ENST00000483508 SLC38A2Q96QD8 506 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 COQ7Q99807 217 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 ARHGDIGQ99819 225 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 SLC17A9Q9BYT1 436 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 WDR26Q9H7D7 661 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 MRPS30Q9NP92 439 aaKnown RBP7.6□□□□□ -1.19
SORT1-205ENST00000483508 MED17Q9NVC6 651 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 TVP23BQ9NYZ1 205 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 TESQ9UGI8 421 aaKnown RBP7.6□□□□□ -1.19
SORT1-205ENST00000483508 SLC13A4Q9UKG4 626 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 ZFR2Q9UPR6 939 aaKnown RBP7.6□□□□□ -1.19
SORT1-205ENST00000483508 CMAHPQ9Y471 501 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 PRKAB1Q9Y478 270 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 PCYT1BQ9Y5K3 369 aaPredicted RBP7.6□□□□□ -1.19
SORT1-205ENST00000483508 HEBP2Q9Y5Z4 205 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 HS3ST3A1Q9Y663 406 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 CHD6Q8TD26 2715 aa7.6□□□□□ -1.19
SORT1-205ENST00000483508 BAHCC1Q9P281 2608 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 PRAMEF27A3QJZ7 478 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 HTR3EA5X5Y0 456 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 IGLON5A6NGN9 336 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 KDM4EB2RXH2 506 aaPredicted RBP7.59□□□□□ -1.19
SORT1-205ENST00000483508 C10orf142B7Z368 130 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 M0R3H8 397 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 ERVH48-1M5A8F1 160 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 TLX2O43763 284 aaPredicted RBP7.59□□□□□ -1.19
SORT1-205ENST00000483508 PRKYO43930 277 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 LCMT2O60294 686 aaKnown RBP7.59□□□□□ -1.19
SORT1-205ENST00000483508 UBXN7O94888 489 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 ALPPP05187 535 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 CHRM4P08173 479 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 HBQ1P09105 142 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 TSPAN19P0C672 248 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 MYF5P13349 255 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 SPNP16150 400 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 TNNI3P19429 210 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 FUT4P22083 530 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 HIST1H1TP22492 207 aaPredicted RBP7.59□□□□□ -1.19
SORT1-205ENST00000483508 ATP5A1P25705 553 aaKnown RBP7.59□□□□□ -1.19
SORT1-205ENST00000483508 PTBP1P26599 531 aaKnown RBP eCLIP7.59□□□□□ -1.19
SORT1-205ENST00000483508 CMPK1P30085 196 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 PRKAR1BP31321 381 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 TRIM23P36406 574 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 RPS19P39019 145 aaKnown RBP7.59□□□□□ -1.19
SORT1-205ENST00000483508 FEN1P39748 380 aaKnown RBP7.59□□□□□ -1.19
SORT1-205ENST00000483508 STAT5AP42229 794 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 LSSP48449 732 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 GIPRP48546 466 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 SLC9A3P48764 834 aa7.59□□□□□ -1.19
SORT1-205ENST00000483508 STXBP1P61764 594 aaKnown RBP7.59□□□□□ -1.19
SORT1-205ENST00000483508 TLE3Q04726 772 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms