RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 OR5M10Q6IEU7 315 aa16.33■□□□□ 0.2
CPNE1-224ENST00000483359 APOOLQ6UXV4 268 aa16.33■□□□□ 0.2
CPNE1-224ENST00000483359 MARCH3Q86UD3 253 aa16.33■□□□□ 0.2
CPNE1-224ENST00000483359 NFKBIDQ8NI38 313 aa16.33■□□□□ 0.2
CPNE1-224ENST00000483359 NSL1Q96IY1 281 aa16.33■□□□□ 0.2
CPNE1-224ENST00000483359 TRNT1Q96Q11 434 aaKnown RBP16.33■□□□□ 0.2
CPNE1-224ENST00000483359 SH3GL1Q99961 368 aa16.33■□□□□ 0.2
CPNE1-224ENST00000483359 ECSITQ9BQ95 431 aa16.33■□□□□ 0.2
CPNE1-224ENST00000483359 GPATCH1Q9BRR8 931 aaKnown RBP16.33■□□□□ 0.2
CPNE1-224ENST00000483359 RYDENQ9NUL5 291 aaKnown RBP16.33■□□□□ 0.2
CPNE1-224ENST00000483359 USP22Q9UPT9 525 aa16.33■□□□□ 0.2
CPNE1-224ENST00000483359 LIPT1Q9Y234 373 aa16.33■□□□□ 0.2
CPNE1-224ENST00000483359 GNB5O14775 395 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 SORBS2O94875 1100 aaKnown RBP16.32■□□□□ 0.2
CPNE1-224ENST00000483359 BMP2P12643 396 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 MAGEA8P43361 318 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 CRISP3P54108 245 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 IFNEQ86WN2 208 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 POGLUT1Q8NBL1 392 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 LSM14AQ8ND56 463 aaKnown RBP16.32■□□□□ 0.2
CPNE1-224ENST00000483359 ZG16BQ96DA0 208 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 TAAR6Q96RI8 345 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 FAM173AQ9BQD7 235 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 ANGPTL4Q9BY76 406 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 SLC38A1Q9H2H9 487 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 UBQLN4Q9NRR5 601 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 CMTM6Q9NX76 183 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 THUMPD1Q9NXG2 353 aaKnown RBP16.32■□□□□ 0.2
CPNE1-224ENST00000483359 TUBA8Q9NY65 449 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-224ENST00000483359 L3MBTL1Q9Y468 752 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 PCDHGB6Q9Y5F9 930 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 HRH3Q9Y5N1 445 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 CHD6Q8TD26 2715 aa16.32■□□□□ 0.2
CPNE1-224ENST00000483359 TTLL8A6PVC2 850 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 C5orf58C9J3I9 102 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 SCDO00767 359 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 GMFGO60234 142 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 KIAA0513O60268 411 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 FADS1O60427 444 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 AQP1P29972 269 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 PSME3P61289 254 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 ADRM1Q16186 407 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 PDZK1Q5T2W1 519 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 C8orf82Q6P1X6 216 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-224ENST00000483359 HACD2Q6Y1H2 254 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 ZNF619Q8N2I2 560 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 CISD2Q8N5K1 135 aaKnown RBP16.31■□□□□ 0.2
CPNE1-224ENST00000483359 FAM98AQ8NCA5 519 aaKnown RBP16.31■□□□□ 0.2
CPNE1-224ENST00000483359 FRMD6Q96NE9 622 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 TREX2Q9BQ50 279 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-224ENST00000483359 TSPAN10Q9H1Z9 355 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-224ENST00000483359 A4GALTQ9NPC4 353 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 GMPR2Q9P2T1 348 aaKnown RBP16.31■□□□□ 0.2
CPNE1-224ENST00000483359 KCNE5Q9UJ90 142 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 PACSIN3Q9UKS6 424 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 WIF1Q9Y5W5 379 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.31■□□□□ 0.2
CPNE1-224ENST00000483359 PRRC2CQ9Y520 2896 aaKnown RBP16.31■□□□□ 0.2
CPNE1-224ENST00000483359 NINQ8N4C6 2090 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 UGT2B17O75795 530 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 T-ENOLP0DO92 83 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 ARAFP10398 606 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 TBXA2RP21731 343 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 CALB2P22676 271 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 CDK6Q00534 326 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 PLGLB1Q02325 96 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 SCARB2Q14108 478 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 SOWAHCQ53LP3 525 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-224ENST00000483359 TBCELQ5QJ74 424 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 PACS2Q86VP3 889 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 PTOV1Q86YD1 416 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 SLC15A3Q8IY34 581 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 HOPXQ9BPY8 73 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-224ENST00000483359 ABCG2Q9UNQ0 655 aa16.31■□□□□ 0.2
CPNE1-224ENST00000483359 C15orf38-AP3S2A0A0A6YYH1 394 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 ANKRD33BA6NCL7 494 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 FAM166BA8MTA8 275 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 B2RBV5 119 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 NME4O00746 187 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 ANGPTL1O95841 491 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 ATP12AP54707 1039 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 MLLT10P55197 1068 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 CD226Q15762 336 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 MAPK14Q16539 360 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 SLC30A6Q6NXT4 461 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 LRRC74BQ6ZQY2 392 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 ARPINQ7Z6K5 226 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 SERPINA11Q86U17 422 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 ZNF597Q96LX8 424 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 TTTY12Q9BZ98 90 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 NTNG1Q9Y2I2 539 aa16.3■□□□□ 0.2
CPNE1-224ENST00000483359 LRRC3CA6NJW4 275 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 NDUFB5O43674 189 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 CLK3P49761 638 aaKnown RBP16.29■□□□□ 0.2
CPNE1-224ENST00000483359 SNTA1Q13424 505 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 ZZZ3Q8IYH5 903 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 RNF148Q8N7C7 305 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 ZNF527Q8NB42 609 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 C11orf65Q8NCR3 313 aa16.29■□□□□ 0.2
CPNE1-224ENST00000483359 RBM15BQ8NDT2 890 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms