RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 CEACAM8P31997 349 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-213ENST00000482192 WNT3P56703 355 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 TP53BP2Q13625 1128 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 CASP8Q14790 479 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 LASP1Q14847 261 aaKnown RBP10.78□□□□□ -0.68
HMGN1-213ENST00000482192 PGS1Q32NB8 556 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 ATG16L1Q676U5 607 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 CDC73Q6P1J9 531 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 BHLHB9Q6PI77 547 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 FIGNL1Q6PIW4 674 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 GALNT10Q86SR1 603 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 LIX1LQ8IVB5 337 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 NAXEQ8NCW5 288 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 TNIP2Q8NFZ5 429 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 OR4C3Q8NH37 302 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 MBD3L2Q8NHZ7 208 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-213ENST00000482192 FAM110BQ8TC76 370 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 SFXN5Q8TD22 340 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 DUSP19Q8WTR2 217 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 NUDT8Q8WV74 236 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 OTUB1Q96FW1 271 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-213ENST00000482192 CHMP6Q96FZ7 201 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 YIPF4Q9BSR8 244 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 ACTRT3Q9BYD9 372 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 RTN4RQ9BZR6 473 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 DPY30Q9C005 99 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 PIGUQ9H490 435 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 CALHM2Q9HA72 323 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 UBQLN4Q9NRR5 601 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 MED11Q9P086 117 aa10.78□□□□□ -0.68
HMGN1-213ENST00000482192 ZNF629Q9UEG4 869 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-213ENST00000482192 RPH3AQ9Y2J0 694 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-213ENST00000482192 ZNF407Q9C0G0 2248 aa10.77□□□□□ -0.68
HMGN1-213ENST00000482192 TRPC5OSA6NMA1 111 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 KDM4EB2RXH2 506 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-213ENST00000482192 ALG1L2C9J202 215 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 LINC01387J3KSC0 135 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 RNASET2O00584 256 aaKnown RBP10.77□□□□□ -0.69
HMGN1-213ENST00000482192 NDUFB5O43674 189 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 OXSR1O95747 527 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-213ENST00000482192 ZNF708P17019 499 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 HK1P19367 917 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 TBXA2RP21731 343 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 TCEA1P23193 301 aaKnown RBP10.77□□□□□ -0.69
HMGN1-213ENST00000482192 SOAT1P35610 550 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 STARP49675 285 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 LHX2P50458 406 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 CLNS1AP54105 237 aaKnown RBP10.77□□□□□ -0.69
HMGN1-213ENST00000482192 CLDN18P56856 261 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 B3GALT5-AS1P59052 145 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 HBA1P69905 142 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 POU6F2P78424 691 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-213ENST00000482192 SRYQ05066 204 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 BCL2A1Q16548 175 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 DPY19L1Q2PZI1 675 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 RAET1LQ5VY80 246 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 OGFOD2Q6N063 350 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 APOOLQ6UXV4 268 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 ZNF295-AS1Q8N0V1 137 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 OR8J2Q8NGG1 315 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 GOT1L1Q8NHS2 421 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-213ENST00000482192 ADAMTS15Q8TE58 950 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 CDS1Q92903 461 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 TESCQ96BS2 214 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 C1GALT1C1Q96EU7 318 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 C14orf79Q96F83 325 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 TUBA1CQ9BQE3 449 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 MANSC1Q9H8J5 431 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 SLC24A3Q9HC58 644 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 GPATCH2Q9NW75 528 aa10.77□□□□□ -0.69
HMGN1-213ENST00000482192 CLCA1A8K7I4 914 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 SLCO1B7G3V0H7 640 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 SCDO00767 359 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 ANKRD28O15084 1053 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 HDAC3O15379 428 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 POU3F2P20265 443 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-213ENST00000482192 ATP6V1C1P21283 382 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 BMP5P22003 454 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 DGKQP52824 942 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 GLYR1Q49A26 553 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-213ENST00000482192 CCNJQ5T5M9 372 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 ANXA8L1Q5VT79 327 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 OR4F3Q6IEY1 312 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 SPATA19Q7Z5L4 167 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 ADGRE4PQ86SQ3 457 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 MISPQ8IVT2 679 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 CLECL1Q8IZS7 167 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 ZNF527Q8NB42 609 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 VPS37AQ8NEZ2 397 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 OR5AK3PQ8NH89 298 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 LRRC46Q96FV0 321 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 ZFP3Q96NJ6 502 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 UCN2Q96RP3 112 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 TM9SF2Q99805 663 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 PIGQQ9BRB3 760 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 MARCOQ9UEW3 520 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-213ENST00000482192 PCDHGB4Q9UN71 923 aa10.76□□□□□ -0.69
HMGN1-213ENST00000482192 PHF3Q92576 2039 aaKnown RBP10.75□□□□□ -0.69
HMGN1-213ENST00000482192 NINQ8N4C6 2090 aa10.75□□□□□ -0.69
HMGN1-213ENST00000482192 RNF103-CHMP3A0A140T963 221 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms