RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ZKSCAN8Q15776 578 aaPredicted RBP1.18□□□□□ -2.22
HPS3-205ENST00000478525 CCDC57Q2TAC2 916 aa1.18□□□□□ -2.22
HPS3-205ENST00000478525 UNC5DQ6UXZ4 953 aa1.18□□□□□ -2.22
HPS3-205ENST00000478525 ACP7Q6ZNF0 438 aa1.18□□□□□ -2.22
HPS3-205ENST00000478525 RANBP3LQ86VV4 465 aaPredicted RBP1.18□□□□□ -2.22
HPS3-205ENST00000478525 STHQ8IWL8 128 aa1.18□□□□□ -2.22
HPS3-205ENST00000478525 CYB561D1Q8N8Q1 229 aa1.18□□□□□ -2.22
HPS3-205ENST00000478525 LINC00304Q8N9R0 145 aa1.18□□□□□ -2.22
HPS3-205ENST00000478525 OR6X1Q8NH79 312 aa1.18□□□□□ -2.22
HPS3-205ENST00000478525 AENQ8WTP8 325 aaKnown RBP1.18□□□□□ -2.22
HPS3-205ENST00000478525 ZCCHC13Q8WW36 166 aaKnown RBP1.18□□□□□ -2.22
HPS3-205ENST00000478525 P3H4Q92791 437 aa1.18□□□□□ -2.22
HPS3-205ENST00000478525 ULBP2Q9BZM5 246 aa1.18□□□□□ -2.22
HPS3-205ENST00000478525 ACOXLQ9NUZ1 547 aa1.18□□□□□ -2.22
HPS3-205ENST00000478525 ZNF586Q9NXT0 402 aa1.18□□□□□ -2.22
HPS3-205ENST00000478525 UBQLN1Q9UMX0 589 aaKnown RBP1.18□□□□□ -2.22
HPS3-205ENST00000478525 TEX264Q9Y6I9 313 aa1.18□□□□□ -2.22
HPS3-205ENST00000478525 PPIAL4EA0A075B759 164 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 PPIAL4CA0A0B4J2A2 164 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 IQANK1A0A1B0GTG1 560 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 PPIAL4DF5H284 164 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 TTI1O43156 1089 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 SPAG7O75391 227 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 GMNNO75496 209 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 CBR3O75828 277 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 CHRNA1P02708 482 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 PCCBP05166 539 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 GSTA1P08263 222 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 PPIAL4FP0DN26 164 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 CCNA2P20248 432 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 CASTP20810 708 aaKnown RBP1.17□□□□□ -2.22
HPS3-205ENST00000478525 GCKP35557 465 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 MRPS11P82912 194 aaKnown RBP1.17□□□□□ -2.22
HPS3-205ENST00000478525 CLPPQ16740 277 aaPredicted RBP1.17□□□□□ -2.22
HPS3-205ENST00000478525 ZNF674Q2M3X9 581 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 CFAP221Q4G0U5 840 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 C16orf54Q6UWD8 224 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 LCA5Q86VQ0 697 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 MTURNQ8N3F0 131 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 OR52I1Q8NGK6 324 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 UBALD1Q8TB05 177 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 DNAJA4Q8WW22 397 aaPredicted RBP1.17□□□□□ -2.22
HPS3-205ENST00000478525 OR1E3Q8WZA6 343 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 RAB39BQ96DA2 213 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 COQ7Q99807 217 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 DDX50Q9BQ39 737 aaKnown RBP1.17□□□□□ -2.22
HPS3-205ENST00000478525 ZNF350Q9GZX5 532 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 EML4Q9HC35 981 aaKnown RBP1.17□□□□□ -2.22
HPS3-205ENST00000478525 LHX9Q9NQ69 397 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 GDAP2Q9NXN4 497 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 NKIRAS2Q9NYR9 191 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 ERVK-18Q9QC07 812 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 MBD2Q9UBB5 411 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 DUSP12Q9UNI6 340 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 RFNGQ9Y644 331 aa1.17□□□□□ -2.22
HPS3-205ENST00000478525 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.17□□□□□ -2.22
HPS3-205ENST00000478525 OOEPA6NGQ2 149 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 SAGE2PA6NJ88 616 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 HCN1O60741 890 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 RAMP1O60894 148 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 PLEKP08567 350 aaPredicted RBP1.16□□□□□ -2.22
HPS3-205ENST00000478525 HNF1AP20823 631 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 FCARP24071 287 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 HOXA9P31269 272 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 SGSHP51688 502 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 LIM2P55344 173 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 SCN1BQ07699 218 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 STXBP2Q15833 593 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 TEX44Q53QW1 395 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 MPP7Q5T2T1 576 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 COX15Q7KZN9 410 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 CCDC83Q8IWF9 413 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 LSMEM1Q8N8F7 131 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 FAM151AQ8WW52 585 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 RPUSD4Q96CM3 377 aaKnown RBP1.16□□□□□ -2.22
HPS3-205ENST00000478525 GBP5Q96PP8 586 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 NLNQ9BYT8 704 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 DCAF13Q9NV06 445 aaKnown RBP1.16□□□□□ -2.22
HPS3-205ENST00000478525 ITM2BQ9Y287 266 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 CARHSP1Q9Y2V2 147 aaKnown RBP1.16□□□□□ -2.22
HPS3-205ENST00000478525 NEUROG3Q9Y4Z2 214 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 DOCK9Q9BZ29 2069 aa1.16□□□□□ -2.22
HPS3-205ENST00000478525 SH3BP5O60239 455 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 CSF2P04141 144 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 SERPINF2P08697 491 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 RHOXF2BP0C7M4 288 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 KIR2DS2P43631 304 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 NOP14P78316 857 aaKnown RBP1.15□□□□□ -2.23
HPS3-205ENST00000478525 KRTAP13-4Q3LI77 160 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 RABGAP1LQ5R372 815 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 LY6G6FQ5SQ64 297 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 PNCKQ6P2M8 343 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 HACD2Q6Y1H2 254 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 DNM1P46Q6ZS02 220 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 SERPINA9Q86WD7 417 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 OR7G3Q8NG95 312 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 MR1Q95460 341 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 OSBPL11Q9BXB4 747 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 CAB39LQ9H9S4 337 aa1.15□□□□□ -2.23
HPS3-205ENST00000478525 SEPT10Q9P0V9 454 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms