RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 SRPRAP08240 638 aaKnown RBP9.15□□□□□ -0.94
CMC1-209ENST00000477739 POLR2CP19387 275 aaPredicted RBP9.15□□□□□ -0.94
CMC1-209ENST00000477739 DDCP20711 480 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 ARPC4P59998 168 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 DUSP2Q05923 314 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 STX4Q12846 297 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 ELAVL3Q14576 367 aaKnown RBP9.15□□□□□ -0.94
CMC1-209ENST00000477739 KCNAB1Q14722 419 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 AGERQ15109 404 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 NDUFAF6Q330K2 333 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 LRRC37A5PQ49AS3 106 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 DMRTC1Q5HYR2 192 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 PRPF38BQ5VTL8 546 aaKnown RBP9.15□□□□□ -0.94
CMC1-209ENST00000477739 FAM111BQ6SJ93 734 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 CCDC190Q86UF4 302 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 ATCAYQ86WG3 371 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 ZNF547Q8IVP9 402 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 DEFB119Q8N690 84 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 OR8S1Q8NH09 359 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 AP3S1Q92572 193 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 TSACCQ96A04 125 aaPredicted RBP9.15□□□□□ -0.94
CMC1-209ENST00000477739 VWCEQ96DN2 955 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 QRFPRQ96P65 431 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 PITX2Q99697 317 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 PSD2Q9BQI7 771 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 SEMA4CQ9C0C4 833 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 SRRQ9GZT4 340 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 MBNL1Q9NR56 388 aaKnown RBP9.15□□□□□ -0.94
CMC1-209ENST00000477739 SPHK1Q9NYA1 384 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 ENOPH1Q9UHY7 261 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 NAALAD2Q9Y3Q0 740 aa9.15□□□□□ -0.94
CMC1-209ENST00000477739 TDRD6O60522 2096 aaKnown RBP9.15□□□□□ -0.95
CMC1-209ENST00000477739 EDDM13A0A1B0GTR0 161 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 ORC5O43913 435 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 ZNF33BQ06732 778 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 CDK10Q15131 360 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 SLC25A25Q6KCM7 469 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 ERN2Q76MJ5 926 aaKnown RBP9.15□□□□□ -0.95
CMC1-209ENST00000477739 NRSN1Q8IZ57 195 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 SDR9C7Q8NEX9 313 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 OR8D4Q8NGM9 314 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 OR13C2Q8NGS9 318 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 LCN9Q8WX39 176 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 PATE1Q8WXA2 126 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 MIXL1Q9H2W2 232 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 B3GAT2Q9NPZ5 323 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 EVA1BQ9NVM1 165 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 OR6C2Q9NZP2 312 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 GNG8Q9UK08 70 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 PCDHGB1Q9Y5G3 927 aa9.15□□□□□ -0.95
CMC1-209ENST00000477739 HEATR5BQ9P2D3 2071 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 CENPVL1A0A0U1RR11 272 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 ZNF670-ZNF695F2Z2N8 137 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 FAAHO00519 579 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 ICMTO60725 284 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 KHDRBS3O75525 346 aaKnown RBP9.14□□□□□ -0.95
CMC1-209ENST00000477739 HLA-DQA2P01906 255 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 RPN2P04844 631 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 ELK1P19419 428 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 PDX1P52945 283 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 GNG2P59768 71 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 DSG2Q14126 1118 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 ZNF234Q14588 700 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 NTRK2Q16620 822 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 HNRNPA1L2Q32P51 320 aaKnown RBP9.14□□□□□ -0.95
CMC1-209ENST00000477739 FRRS1Q6ZNA5 592 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 SFTPA2Q8IWL1 248 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 TMEM99Q8N816 258 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 SPPL3Q8TCT6 385 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 SNX33Q8WV41 574 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 ZNF354BQ96LW1 612 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 LRRC3BQ96PB8 259 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 DKK3Q9UBP4 350 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 FTSJ1Q9UET6 329 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 IKZF2Q9UKS7 526 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 NCKAP1Q9Y2A7 1128 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 CEP250Q9BV73 2442 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 TMEM229AB2RXF0 380 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 MPZL2O60487 215 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 FMO6PO60774 539 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 PPP1R3DO95685 299 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 TRHRP34981 398 aaPredicted RBP9.14□□□□□ -0.95
CMC1-209ENST00000477739 ACTR1BP42025 376 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 FNTBP49356 437 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 ACTR1AP61163 376 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 C1orf61Q13536 156 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 ENTPD8Q5MY95 495 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 PXDC1Q5TGL8 231 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 SLC36A4Q6YBV0 504 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 CXXC5Q7LFL8 322 aaKnown RBP9.14□□□□□ -0.95
CMC1-209ENST00000477739 KLHL36Q8N4N3 616 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 CCL4L1Q8NHW4 92 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 LRRC20Q8TCA0 184 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 PDCD1LG2Q9BQ51 273 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 FBXO34Q9NWN3 711 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 ATXN7L1Q9ULK2 861 aaPredicted RBP9.14□□□□□ -0.95
CMC1-209ENST00000477739 V9GYH0 126 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 CFAP54Q96N23 3096 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 SCN8AQ9UQD0 1980 aa9.14□□□□□ -0.95
CMC1-209ENST00000477739 ACOD1A6NK06 481 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms