RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TMEM150AQ86TG1 271 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 C2CD4AQ8NCU7 369 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 ZNF548Q8NEK5 533 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 FAM46DQ8NEK8 389 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 CLP1Q92989 425 aaKnown RBP11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 UBE2FQ969M7 185 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 BSCL2Q96G97 398 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 BRINP2Q9C0B6 783 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 CCDC86Q9H6F5 360 aaKnown RBP11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 METTL17Q9H7H0 456 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 SLC2A6Q9UGQ3 507 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 ACSL6Q9UKU0 697 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 MMACHCQ9Y4U1 282 aa11.9□□□□□ -0.5
RTFDC1-207ENST00000477573 A0A1W2PPC1 479 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 A8MXE2 369 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 SSNA1O43805 119 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 FADS1O60427 444 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 KHDRBS3O75525 346 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 ALDOBP05062 364 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 OR8G3PP0DMU2 310 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 DRD2P14416 443 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 GABRR2P28476 465 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 CTBP1Q13363 440 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 RNF219Q5W0B1 726 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 OR2T5Q6IEZ7 315 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 LRRN1Q6UXK5 716 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 C16orf59Q7L2K0 433 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 ARL14EPQ8N8R7 260 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 OR9A2Q8NGT5 310 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 OR2T29Q8NH02 315 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 TM9SF4Q92544 642 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 S100PBPQ96BU1 408 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 FAM122AQ96E09 287 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 OMDQ99983 421 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 POLDIP3Q9BY77 421 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 GSTO2Q9H4Y5 243 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 IL21Q9HBE4 155 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 BARX1Q9HBU1 254 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 VNN3Q9NY84 501 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 ZIM2Q9NZV7 527 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 DNMT3AQ9Y6K1 912 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 KIAA1671Q9BY89 1806 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 TMEM200CA6NKL6 621 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 A8MT66 165 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 MKRN2OSH3BPM6 223 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 AP4M1O00189 453 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 BCAT2O15382 392 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 SIGLEC5O15389 551 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 TBL1XO60907 577 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 SEMA7AO75326 666 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 TCRBP04435 133 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 CKMP06732 381 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 GIPP09681 153 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 RCC1P18754 421 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 CDKN2CP42773 168 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 SLC1A2P43004 574 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 SUCLG1P53597 346 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 RAP2BP61225 183 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 SIGLEC14Q08ET2 396 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 BOP1Q14137 746 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 GSG1Q2KHT4 349 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 ALG11Q2TAA5 492 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 RNASE10Q5GAN6 216 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 COL13A1Q5TAT6 717 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 TXNDC8Q6A555 127 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 SPNS3Q6ZMD2 512 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 ISCA2Q86U28 154 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 OR13C3Q8NGS6 347 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 OR10K1Q8NGX5 313 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 L3HYPDHQ96EM0 354 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 DMRTA2Q96SC8 542 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 C7orf50Q9BRJ6 194 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 NLNQ9BYT8 704 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 ABCG5Q9H222 651 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 MFSD1Q9H3U5 465 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 AIG1Q9NVV5 245 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 UTS2RQ9UKP6 389 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 GOLT1BQ9Y3E0 138 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 PLXNA4Q9HCM2 1894 aa11.89□□□□□ -0.51
RTFDC1-207ENST00000477573 MYLKQ15746 1914 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 FAM95CA0A1B0GW59 222 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 AGRPO00253 132 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 CXCR6O00574 342 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 INSIG1O15503 277 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 SUSD5O60279 629 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 TOXO94900 526 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 MT-CO1P00395 513 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 EGFP01133 1207 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 PIPP12273 146 aaPredicted RBP11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 HGFP14210 728 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 SAT1P21673 171 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 EPHA2P29317 976 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 MAT2AP31153 395 aaKnown RBP11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 BTCP35070 178 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 ADH7P40394 386 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 CCR6P51684 374 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 ZP1P60852 638 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 SLC7A9P82251 487 aa11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 ZNHIT3Q15649 155 aaPredicted RBP11.88□□□□□ -0.51
RTFDC1-207ENST00000477573 NTRK2Q16620 822 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms