RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 THY1P04216 161 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 KLK3P07288 261 aaPredicted RBP13.35□□□□□ -0.27
COL4A6-206ENST00000477085 LSM11P83369 360 aaKnown RBP eCLIP13.35□□□□□ -0.27
COL4A6-206ENST00000477085 LARS2Q15031 903 aaKnown RBP13.35□□□□□ -0.27
COL4A6-206ENST00000477085 PDZK1Q5T2W1 519 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 MRPL2Q5T653 305 aaKnown RBP13.35□□□□□ -0.27
COL4A6-206ENST00000477085 ZNF770Q6IQ21 691 aaPredicted RBP13.35□□□□□ -0.27
COL4A6-206ENST00000477085 ISLR2Q6UXK2 745 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 GALNT5Q7Z7M9 940 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 ZNF441Q8N8Z8 693 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 PIK3C3Q8NEB9 887 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 DEFB124Q8NES8 71 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 OR9Q2Q8NGE9 314 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 ALPK1Q96QP1 1244 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 FEVQ99581 238 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 CRB3Q9BUF7 120 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 ANKRD60Q9BZ19 345 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 LIN28AQ9H9Z2 209 aaKnown RBP13.35□□□□□ -0.27
COL4A6-206ENST00000477085 AKAP7Q9P0M2 348 aaPredicted RBP13.35□□□□□ -0.27
COL4A6-206ENST00000477085 OR10H1Q9Y4A9 318 aa13.35□□□□□ -0.27
COL4A6-206ENST00000477085 C2orf92A0A1B0GVN3 265 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 FRG2CA6NGY1 282 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 SAGE2PA6NJ88 616 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 ADAM11O75078 769 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 DKK1O94907 266 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 NTN1O95631 604 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 UBTFL6P0CB48 400 aaPredicted RBP13.34□□□□□ -0.27
COL4A6-206ENST00000477085 ELAVL4P26378 380 aaKnown RBP13.34□□□□□ -0.27
COL4A6-206ENST00000477085 CAPGP40121 348 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 ARHGDIAP52565 204 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 ZNF141Q15928 474 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.34□□□□□ -0.27
COL4A6-206ENST00000477085 COLEC12Q5KU26 742 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 HES3Q5TGS1 186 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 RNF220Q5VTB9 566 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 USP51Q70EK9 711 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 DHRSXQ8N5I4 330 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 GIPC3Q8TF64 312 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 CYGBQ8WWM9 190 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 PMM1Q92871 262 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 EFHD2Q96C19 240 aaPredicted RBP13.34□□□□□ -0.27
COL4A6-206ENST00000477085 LCORQ96JN0 433 aaPredicted RBP13.34□□□□□ -0.27
COL4A6-206ENST00000477085 TAAR9Q96RI9 348 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 GAL3ST4Q96RP7 486 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 SEMA4CQ9C0C4 833 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 WWTR1Q9GZV5 400 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 FAM118AQ9NWS6 357 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 PPIEQ9UNP9 301 aaKnown RBP13.34□□□□□ -0.27
COL4A6-206ENST00000477085 DMXL1Q9Y485 3027 aa13.34□□□□□ -0.27
COL4A6-206ENST00000477085 EP300Q09472 2414 aaPredicted RBP13.34□□□□□ -0.27
COL4A6-206ENST00000477085 ZNF292O60281 2723 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 TTC36A6NLP5 189 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 TMX2-CTNND1H3BSU7 103 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 SEC24DO94855 1032 aaPredicted RBP13.33□□□□□ -0.28
COL4A6-206ENST00000477085 H1F0P07305 194 aaKnown RBP13.33□□□□□ -0.28
COL4A6-206ENST00000477085 GKN3PP0CG01 181 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 IGFBP5P24593 272 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 EPHA2P29317 976 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 GTF2A1P52655 376 aaPredicted RBP13.33□□□□□ -0.28
COL4A6-206ENST00000477085 RAB15P59190 212 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 KCNAB2Q13303 367 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 LIN52Q52LA3 116 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 C16orf47Q6ZP98 133 aaPredicted RBP13.33□□□□□ -0.28
COL4A6-206ENST00000477085 CPEB2Q7Z5Q1 589 aaKnown RBP13.33□□□□□ -0.28
COL4A6-206ENST00000477085 MARCH9Q86YJ5 346 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 PRR22Q8IZ63 422 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 B3GNT7Q8NFL0 401 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 OR10G2Q8NGC3 310 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 SLC7A13Q8TCU3 470 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 CNOT9Q92600 299 aaKnown RBP13.33□□□□□ -0.28
COL4A6-206ENST00000477085 DIO2Q92813 273 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 NR1H4Q96RI1 486 aaPredicted RBP13.33□□□□□ -0.28
COL4A6-206ENST00000477085 NIPSNAP1Q9BPW8 284 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 G6PC3Q9BUM1 346 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 Q9H521 79 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 FOXJ2Q9P0K8 574 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 PCDHGA10Q9Y5H3 936 aa13.33□□□□□ -0.28
COL4A6-206ENST00000477085 SPAARA0A1B0GVQ0 90 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 TMEM200CA6NKL6 621 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 CPSF4LA6NMK7 179 aaKnown RBP13.32□□□□□ -0.28
COL4A6-206ENST00000477085 E9PQ18 207 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 PLD2O14939 933 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 IL33O95760 270 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 DLGAP3O95886 979 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 GASTP01350 101 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 HTR2AP28223 471 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 NR0B1P51843 470 aaKnown RBP13.32□□□□□ -0.28
COL4A6-206ENST00000477085 NCF4Q15080 339 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 ENTPD8Q5MY95 495 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 PAPD4Q6PIY7 484 aaKnown RBP13.32□□□□□ -0.28
COL4A6-206ENST00000477085 OFCC1Q8IZS5 231 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 ATG16L2Q8NAA4 619 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 METTL21AQ8WXB1 218 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 ART5Q96L15 291 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 PRRC1Q96M27 445 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 RDH12Q96NR8 316 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 PHOX2BQ99453 314 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 PSD2Q9BQI7 771 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 DDA1Q9BW61 102 aa13.32□□□□□ -0.28
COL4A6-206ENST00000477085 COPS7AQ9UBW8 275 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms