RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SLC41A3Q96GZ6 507 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 FAM46AQ96IP4 442 aaKnown RBP15.34■□□□□ 0.05
TMEM53-208ENST00000476724 NELL2Q99435 816 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 MED18Q9BUE0 208 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 TXNL4BQ9NX01 149 aaKnown RBP15.34■□□□□ 0.05
TMEM53-208ENST00000476724 MRPS17Q9Y2R5 130 aaKnown RBP15.34■□□□□ 0.05
TMEM53-208ENST00000476724 SLC22A7Q9Y694 548 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 VCANP13611 3396 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 FRS3O43559 492 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 ZIC2O95409 532 aaPredicted RBP15.34■□□□□ 0.05
TMEM53-208ENST00000476724 UGT2B7P16662 529 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 RABIFP47224 123 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 DEFB134Q4QY38 66 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 MANEAQ5SRI9 462 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 TYW3Q6IPR3 259 aaKnown RBP15.34■□□□□ 0.05
TMEM53-208ENST00000476724 GDF7Q7Z4P5 450 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 SETD6Q8TBK2 473 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 RSC1A1Q92681 617 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 HPS1Q92902 700 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 BARHL1Q9BZE3 327 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 PIGUQ9H490 435 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 SNTG1Q9NSN8 517 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 CNIH4Q9P003 139 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 PILRAQ9UKJ1 303 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 C19orf53Q9UNZ5 99 aaPredicted RBP15.34■□□□□ 0.05
TMEM53-208ENST00000476724 ENTPD2Q9Y5L3 495 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 SPIN1Q9Y657 262 aaPredicted RBP15.34■□□□□ 0.05
TMEM53-208ENST00000476724 SPACA6W5XKT8 324 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 SCN3AQ9NY46 2000 aa15.34■□□□□ 0.05
TMEM53-208ENST00000476724 RGS5O15539 181 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 KLF4O43474 513 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 HMGN1P05114 100 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 IFI6P09912 130 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 CPMP14384 443 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 ZCCHC12Q6PEW1 402 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 TMPRSS11AQ6ZMR5 421 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 NKAIN4Q8IVV8 208 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 CACTIN-AS1Q8N1I8 211 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 PMM1Q92871 262 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 SLC25A46Q96AG3 418 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 TXNDC15Q96J42 360 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 SDF2Q99470 211 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 ACTR10Q9NZ32 417 aa15.33■□□□□ 0.04
TMEM53-208ENST00000476724 A0A087WV62 115 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 A0A1W2PPC4 97 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 WWP2O00308 870 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 SLC30A4O14863 429 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 SNPHO15079 494 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 SURF4O15260 269 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 CTSVO60911 334 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 THEGLP0DJG4 465 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 SIM1P81133 766 aaPredicted RBP15.32■□□□□ 0.04
TMEM53-208ENST00000476724 FCRL6Q6DN72 434 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 SFTPA2Q8IWL1 248 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 ZNF655Q8N720 491 aaPredicted RBP15.32■□□□□ 0.04
TMEM53-208ENST00000476724 POGLUT1Q8NBL1 392 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 ZCCHC10Q8TBK6 192 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 UFD1Q92890 307 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 TMCO6Q96DC7 493 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 TRMT61AQ96FX7 289 aaKnown RBP15.32■□□□□ 0.04
TMEM53-208ENST00000476724 KCTD7Q96MP8 289 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 SDHCQ99643 169 aaPredicted RBP15.32■□□□□ 0.04
TMEM53-208ENST00000476724 ZFYVE21Q9BQ24 234 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 ARHGAP9Q9BRR9 750 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 SATB2Q9UPW6 733 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 GSTK1Q9Y2Q3 226 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 FAM221BA6H8Z2 402 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 P2RX6O15547 441 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 CELA2BP08218 269 aaPredicted RBP15.32■□□□□ 0.04
TMEM53-208ENST00000476724 CDH11P55287 796 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 PSPHP78330 225 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 EIF2B5Q13144 721 aaKnown RBP15.32■□□□□ 0.04
TMEM53-208ENST00000476724 DUSP5Q16690 384 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 AADACL4Q5VUY2 407 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 HSDL2Q6YN16 418 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 ZNF836Q6ZNA1 936 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 TRIM73Q86UV7 250 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 RANBP3LQ86VV4 465 aaPredicted RBP15.32■□□□□ 0.04
TMEM53-208ENST00000476724 TRIM48Q8IWZ4 208 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 NRMQ8IXM6 262 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 CHAC2Q8WUX2 184 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 PATE1Q8WXA2 126 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 ITFG2Q969R8 447 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 RERGQ96A58 199 aaPredicted RBP15.32■□□□□ 0.04
TMEM53-208ENST00000476724 CARD8Q9Y2G2 431 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 GPR52Q9Y2T5 361 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 CMAHPQ9Y471 501 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 CDH10Q9Y6N8 788 aa15.32■□□□□ 0.04
TMEM53-208ENST00000476724 ZNF217O75362 1048 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 KCNK2O95069 426 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 CDRT1O95170 752 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 DBIP07108 87 aaKnown RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 GNSP15586 552 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 POLR2CP19387 275 aaPredicted RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 FGF9P31371 208 aaPredicted RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 SLC9A3P48764 834 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 EEF1A1P68104 462 aaKnown RBP15.31■□□□□ 0.04
TMEM53-208ENST00000476724 MAP4K2Q12851 820 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 DSG2Q14126 1118 aa15.31■□□□□ 0.04
TMEM53-208ENST00000476724 ZNF628Q5EBL2 1059 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms