RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 HOXB7P09629 217 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 NPIPA8P0DM63 369 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 GABRA1P14867 456 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 ABOP16442 354 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 HLA-DPA1P20036 260 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 KLRK1P26718 216 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 HOXC8P31273 242 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 NNMTP40261 264 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 MNDAP41218 407 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 ACAA2P42765 397 aaKnown RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 SLC1A2P43004 574 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 GPR4P46093 362 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 PITPNBP48739 271 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 FHITP49789 147 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 ACLYP53396 1101 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 CRYBB1P53674 252 aaPredicted RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 CDH11P55287 796 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 AP3S2P59780 193 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 MAXP61244 160 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 MRPS10P82664 201 aaKnown RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 ELP6Q0PNE2 266 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 EIF4EBP2Q13542 120 aaPredicted RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 CDH18Q13634 790 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 KEAP1Q14145 624 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 HLXQ14774 488 aaPredicted RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 RPS6KA2Q15349 733 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 HAGHQ16775 308 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 FAM187BQ17R55 369 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 PRAMEF20Q5VT98 475 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 LIPKQ5VXJ0 399 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 TMEM198Q66K66 360 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 OVOS1Q6IE37 1185 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 OR52W1Q6IF63 320 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 CDPF1Q6NVV7 123 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 METAP1DQ6UB28 335 aaPredicted RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 LRRN1Q6UXK5 716 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 SLCO4C1Q6ZQN7 724 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 TMEM179Q6ZVK1 233 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 TECPR1Q7Z6L1 1165 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 PXKQ7Z7A4 578 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 RHOT1Q8IXI2 618 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 RIMKLAQ8IXN7 391 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 ZNF295-AS1Q8N0V1 137 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 SYNE4Q8N205 404 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 RTL3Q8N8U3 475 aaKnown RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 HSD17B11Q8NBQ5 300 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 TMEM104Q8NE00 496 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 BEST4Q8NFU0 473 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 OR4F6Q8NGB9 312 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 OR2D3Q8NGH3 330 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 OR2T35Q8NGX2 323 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 DUSP19Q8WTR2 217 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 NPRL2Q8WTW4 380 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 STYXQ8WUJ0 223 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 PHYHIPQ92561 330 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 EXTL1Q92935 676 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 GTPBP3Q969Y2 492 aaKnown RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 ORAI1Q96D31 301 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 FAM120BQ96EK7 910 aaKnown RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 ELMOD3Q96FG2 381 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 SENP5Q96HI0 755 aaPredicted RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 DIRAS2Q96HU8 199 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 MTERF1Q99551 399 aaKnown RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 TEAD3Q99594 435 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 PCGF1Q9BSM1 259 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 SPATA5L1Q9BVQ7 753 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 SNHG12Q9BXW3 62 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 TMPRSS13Q9BYE2 586 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 ELOVL4Q9GZR5 314 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 ST6GALNAC4Q9H4F1 302 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 IGFLR1Q9H665 355 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 RNF167Q9H6Y7 350 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 NMNAT1Q9HAN9 279 aaPredicted RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 SLC6A20Q9NP91 592 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 ADAP2Q9NPF8 381 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 TMEM138Q9NPI0 162 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 SNTG1Q9NSN8 517 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 VNN3Q9NY84 501 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 CALML5Q9NZT1 146 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 IL17BQ9UHF5 180 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 GNG8Q9UK08 70 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 FBXO7Q9Y3I1 522 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 KCTD3Q9Y597 815 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 ZNF541Q9H0D2 1346 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 SPATA31D1Q6ZQQ2 1576 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 ZFC3H1O60293 1989 aaKnown RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 A4D1N5 150 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 C5orf51A6NDU8 294 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 SPATA31C2B4DYI2 1134 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 LRRN3E7EW58 273 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 PRR23D1E9PI22 279 aaPredicted RBP3.89□□□□□ -1.79
CD55-208ENST00000476590 RFXAPO00287 272 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CCSO14618 274 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 MSH4O15457 936 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 SLC37A4O43826 429 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 OR2T1O43869 369 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 CDC14BO60729 498 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 SEMA7AO75326 666 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 ATP6AP2O75787 350 aa3.89□□□□□ -1.79
CD55-208ENST00000476590 VAMP5O95183 116 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms