RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 ABCA7Q8IZY2 2146 aa3.14□□□□□ -1.91
SDHB-204ENST00000475049 COL2A1P02458 1487 aaPredicted RBP3.14□□□□□ -1.91
SDHB-204ENST00000475049 ZCCHC6Q5VYS8 1495 aaKnown RBP3.14□□□□□ -1.91
SDHB-204ENST00000475049 ABCA8O94911 1581 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 ADAMTS12P58397 1594 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 NCAPD2Q15021 1401 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 FGD6Q6ZV73 1430 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 A0A0U1RQV5 110 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 RGSL1A5PLK6 1076 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 RNF222A6NCQ9 220 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 LRRC30A6NM36 301 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 ANP32DO95626 131 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 THRBP10828 461 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 TNNI3P19429 210 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 CYP2F1P24903 491 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 GDF1P27539 372 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 AXLP30530 894 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 CD86P42081 329 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 SLC25A1P53007 311 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 POLR2FP61218 127 aaKnown RBP3.13□□□□□ -1.91
SDHB-204ENST00000475049 NUCB2P80303 420 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 PRKCEQ02156 737 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 PLOD1Q02809 727 aaPredicted RBP3.13□□□□□ -1.91
SDHB-204ENST00000475049 SCGB2A2Q13296 93 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 TFDP1Q14186 410 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 TGIF1Q15583 401 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 TRIP10Q15642 601 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 CAMK4Q16566 473 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 GSG1Q2KHT4 349 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 CYBRD1Q53TN4 286 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 ZBED8Q8IZ13 594 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 STKLD1Q8NE28 680 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 KLHL30-AS1Q8NEE0 82 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 ZPLD1Q8TCW7 415 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 UPRTQ96BW1 309 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 SERAC1Q96JX3 654 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 ELOVL4Q9GZR5 314 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 ECT2Q9H8V3 914 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 EXOSC3Q9NQT5 275 aaKnown RBP3.13□□□□□ -1.91
SDHB-204ENST00000475049 HPF1Q9NWY4 346 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 RDH8Q9NYR8 311 aa3.13□□□□□ -1.91
SDHB-204ENST00000475049 ISY1Q9ULR0 285 aaKnown RBP3.13□□□□□ -1.91
SDHB-204ENST00000475049 POLR1AO95602 1720 aaPredicted RBP3.13□□□□□ -1.91
SDHB-204ENST00000475049 ZNF142P52746 1687 aaPredicted RBP3.12□□□□□ -1.91
SDHB-204ENST00000475049 SHPRHQ149N8 1683 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 UHRF1BP1LA0JNW5 1464 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 RALGAPBQ86X10 1494 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 F8WDY8 70 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 SLC2A10O95528 541 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 H2AFZP0C0S5 128 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 CT45A10P0DMU9 189 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 ANXA3P12429 323 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 PTBP1P26599 531 aaKnown RBP eCLIP3.12□□□□□ -1.915e-7■■□□□ 13.3
SDHB-204ENST00000475049 DPP4P27487 766 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 PTGFRP43088 359 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 OR1D4P47884 311 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 ALDH3B2P48448 385 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 TRPC1P48995 793 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 CXCL6P80162 114 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 HTD2P86397 168 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 PDZK1IP1Q13113 114 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 QRICH1Q2TAL8 776 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 TTC31Q49AM3 519 aaPredicted RBP3.12□□□□□ -1.91
SDHB-204ENST00000475049 C2orf66Q6UXQ4 117 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 BAIAP2L2Q6UXY1 529 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 CATSPER4Q7RTX7 472 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 LRRC70Q7Z2Q7 622 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 ADIPOR1Q96A54 375 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 TBC1D31Q96DN5 1066 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 DHTKD1Q96HY7 919 aaPredicted RBP3.12□□□□□ -1.91
SDHB-204ENST00000475049 VPS35Q96QK1 796 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 MEPEQ9NQ76 525 aaPredicted RBP3.12□□□□□ -1.91
SDHB-204ENST00000475049 MIEF1Q9NQG6 463 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 POLE3Q9NRF9 147 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 RBM28Q9NW13 759 aaKnown RBP3.12□□□□□ -1.91
SDHB-204ENST00000475049 VSIG4Q9Y279 399 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 AP4B1Q9Y6B7 739 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 EFCAB5A4FU69 1503 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 ZFYVE16Q7Z3T8 1539 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 STRCP1A6NGW2 1772 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 CCDC7Q96M83 1385 aa3.12□□□□□ -1.91
SDHB-204ENST00000475049 PCNTO95613 3336 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 ADGBQ8N7X0 1667 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 IGLV3-10A0A075B6K4 115 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 A0A087WZY1 265 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 C19orf81C9J6K1 198 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 TM9SF1O15321 606 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 SRSF10O75494 262 aaKnown RBP3.11□□□□□ -1.91
SDHB-204ENST00000475049 NOL4O94818 638 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 DIRAS3O95661 229 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 AK1P00568 194 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 IFNB1P01574 187 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 JCHAINP01591 159 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 CALCBP10092 127 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 NCF1P14598 390 aaPredicted RBP3.11□□□□□ -1.91
SDHB-204ENST00000475049 H2AFXP16104 143 aaPredicted RBP3.11□□□□□ -1.91
SDHB-204ENST00000475049 IGFBP5P24593 272 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 CYLC1P35663 651 aaPredicted RBP3.11□□□□□ -1.91
SDHB-204ENST00000475049 XCR1P46094 333 aa3.11□□□□□ -1.91
SDHB-204ENST00000475049 GNPDA1P46926 289 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms