RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 ZNF700Q9H0M5 742 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 KCNE5Q9UJ90 142 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 ZNF443Q9Y2A4 671 aaPredicted RBP18.81■□□□□ 0.6
CDHR3-210ENST00000474330 PCDHGA10Q9Y5H3 936 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 IGHV1-45A0A0A0MS14 117 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 C21orf140B9A014 251 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 IFNW1P05000 195 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 IL7RP16871 459 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 ITPKBP27987 946 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 RFX3P48380 749 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 SSPNQ14714 243 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 MAPK14Q16539 360 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 DECR1Q16698 335 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 GRAMD1BQ3KR37 738 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 FLYWCH1Q4VC44 716 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 C19orf48Q6RUI8 117 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 COMTD1Q86VU5 262 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 NUBPLQ8TB37 319 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 TP53INP1Q96A56 240 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 HSPBAP1Q96EW2 488 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 DCBLD2Q96PD2 775 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 GPR87Q9BY21 358 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 MRTO4Q9UKD2 239 aaKnown RBP18.8■□□□□ 0.6
CDHR3-210ENST00000474330 CHST2Q9Y4C5 530 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 ENPP4Q9Y6X5 453 aa18.8■□□□□ 0.6
CDHR3-210ENST00000474330 TERTO14746 1132 aaKnown RBP18.79■□□□□ 0.6
CDHR3-210ENST00000474330 ACOX3O15254 700 aa18.79■□□□□ 0.6
CDHR3-210ENST00000474330 PRKNO60260 465 aaPredicted RBP18.79■□□□□ 0.6
CDHR3-210ENST00000474330 IL33O95760 270 aa18.79■□□□□ 0.6
CDHR3-210ENST00000474330 NR0B1P51843 470 aaKnown RBP18.79■□□□□ 0.6
CDHR3-210ENST00000474330 PSPHP78330 225 aa18.79■□□□□ 0.6
CDHR3-210ENST00000474330 DNASE1L3Q13609 305 aa18.79■□□□□ 0.6
CDHR3-210ENST00000474330 CARM1Q86X55 608 aa18.79■□□□□ 0.6
CDHR3-210ENST00000474330 AMER2Q8N7J2 671 aa18.79■□□□□ 0.6
CDHR3-210ENST00000474330 TMBIM1Q969X1 311 aa18.79■□□□□ 0.6
CDHR3-210ENST00000474330 NACC2Q96BF6 587 aa18.79■□□□□ 0.6
CDHR3-210ENST00000474330 IMMP1LQ96LU5 166 aa18.79■□□□□ 0.6
CDHR3-210ENST00000474330 CIB1Q99828 191 aa18.79■□□□□ 0.6
CDHR3-210ENST00000474330 TACO1Q9BSH4 297 aaKnown RBP18.79■□□□□ 0.6
CDHR3-210ENST00000474330 CNOT11Q9UKZ1 510 aaKnown RBP18.79■□□□□ 0.6
CDHR3-210ENST00000474330 OAZ3Q9UMX2 235 aa18.79■□□□□ 0.6
CDHR3-210ENST00000474330 SLC9A8Q9Y2E8 581 aa18.79■□□□□ 0.6
CDHR3-210ENST00000474330 NPIPA5A0A0B4J1W7 369 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 CENPVL1A0A0U1RR11 272 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 NPIPA7E9PJI5 369 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 NPIPB9F8W1W9 429 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 PEX12O00623 359 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 SOCS6O14544 535 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 DIRAS1O95057 198 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 NPIPA8P0DM63 369 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 COX6A1P12074 109 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 NID1P14543 1247 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 PSMD4P55036 377 aaKnown RBP18.78■□□□□ 0.6
CDHR3-210ENST00000474330 RPS18P62269 152 aaKnown RBP18.78■□□□□ 0.6
CDHR3-210ENST00000474330 EEF1A1P68104 462 aaKnown RBP18.78■□□□□ 0.6
CDHR3-210ENST00000474330 NRF1Q16656 503 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 LIN52Q52LA3 116 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 KIRREL2Q6UWL6 708 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 ZNF836Q6ZNA1 936 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 OR4D11Q8NGI4 311 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 LMF1Q96S06 567 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 ARHGDIGQ99819 225 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 C9orf16Q9BUW7 83 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 KLHL28Q9NXS3 571 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 SLC13A4Q9UKG4 626 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 DTNAQ9Y4J8 743 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 ZFYVE26Q68DK2 2539 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 TRBV11-1A0A0K0K1C0 115 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 SAC3D1A6NKF1 404 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 DNAJB5O75953 348 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 ZNF26P17031 533 aaPredicted RBP18.78■□□□□ 0.6
CDHR3-210ENST00000474330 RHCEP18577 417 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 DLSTP36957 453 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 ATP12AP54707 1039 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 ZNF141Q15928 474 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 EXT1Q16394 746 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 EIPR1Q53HC9 387 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 ZBTB49Q6ZSB9 765 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 EPHX4Q8IUS5 362 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 CLIP4Q8N3C7 705 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 OR11G2Q8NGC1 345 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 OR5L2Q8NGL0 311 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 VANGL1Q8TAA9 524 aaPredicted RBP18.78■□□□□ 0.6
CDHR3-210ENST00000474330 OIT3Q8WWZ8 545 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 DIO2Q92813 273 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 WFDC6Q9BQY6 131 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 COQ10BQ9H8M1 238 aa18.78■□□□□ 0.6
CDHR3-210ENST00000474330 FAM32AQ9Y421 112 aaKnown RBP18.78■□□□□ 0.6
CDHR3-210ENST00000474330 ZFAND5O76080 213 aa18.77■□□□□ 0.6
CDHR3-210ENST00000474330 ZNF23P17027 643 aa18.77■□□□□ 0.6
CDHR3-210ENST00000474330 LCN1P31025 176 aa18.77■□□□□ 0.6
CDHR3-210ENST00000474330 DCTP40126 519 aa18.77■□□□□ 0.6
CDHR3-210ENST00000474330 COL28A1Q2UY09 1125 aa18.77■□□□□ 0.6
CDHR3-210ENST00000474330 RNF220Q5VTB9 566 aa18.77■□□□□ 0.6
CDHR3-210ENST00000474330 PPP4R4Q6NUP7 873 aa18.77■□□□□ 0.6
CDHR3-210ENST00000474330 TCTN3Q6NUS6 607 aa18.77■□□□□ 0.6
CDHR3-210ENST00000474330 PPP1R32Q7Z5V6 425 aa18.77■□□□□ 0.6
CDHR3-210ENST00000474330 DTX1Q86Y01 620 aa18.77■□□□□ 0.6
CDHR3-210ENST00000474330 LACC1Q8IV20 430 aa18.77■□□□□ 0.6
CDHR3-210ENST00000474330 KBTBD2Q8IY47 623 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms