RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 TFDP1Q14186 410 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 LPAL2Q16609 132 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 LINC01620Q4KN68 170 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 CEACAM19Q7Z692 300 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 UPRTQ96BW1 309 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 DTNBP1Q96EV8 351 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 SOSTQ9BQB4 213 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 COG4Q9H9E3 785 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 GPN2Q9H9Y4 310 aaPredicted RBP4.89□□□□□ -1.63
SEC22A-204ENST00000473494 POLD4Q9HCU8 107 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 GALPQ9UBC7 116 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 RNF6Q9Y252 685 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 EIF3LQ9Y262 564 aaKnown RBP4.89□□□□□ -1.63
SEC22A-204ENST00000473494 TET3O43151 1660 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 GCC2Q8IWJ2 1684 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 ROCK1Q13464 1354 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 NAIPQ13075 1403 aa4.89□□□□□ -1.63
SEC22A-204ENST00000473494 NLRP1Q9C000 1473 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 IQGAP3Q86VI3 1631 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 ALKQ9UM73 1620 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 WASHC1A8K0Z3 465 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 SDHDO14521 159 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 MAPK13O15264 365 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 GALR3O60755 368 aaPredicted RBP4.88□□□□□ -1.63
SEC22A-204ENST00000473494 RAMP1O60894 148 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 SERPINB2P05120 415 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 CYLC1P35663 651 aaPredicted RBP4.88□□□□□ -1.63
SEC22A-204ENST00000473494 ELK3P41970 407 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 CSRP3P50461 194 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 ARHGDIAP52565 204 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 HSD17B7P56937 341 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 ELP6Q0PNE2 266 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 TRIP10Q15642 601 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 ZIC1Q15915 447 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 STKLD1Q8NE28 680 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 HPDLQ96IR7 371 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 CALHM2Q9HA72 323 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 RCOR3Q9P2K3 495 aaPredicted RBP4.88□□□□□ -1.63
SEC22A-204ENST00000473494 AP4B1Q9Y6B7 739 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 XIRP1Q702N8 1843 aaKnown RBP4.88□□□□□ -1.63
SEC22A-204ENST00000473494 NPHP4O75161 1426 aaPredicted RBP4.88□□□□□ -1.63
SEC22A-204ENST00000473494 ARHGAP23Q9P227 1491 aa4.88□□□□□ -1.63
SEC22A-204ENST00000473494 IQGAP1P46940 1657 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 C11orf98E9PRG8 122 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 SH3BGRLO75368 114 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 KBTBD11O94819 623 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 MFN2O95140 757 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 VENTXO95231 258 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 HSPA5P11021 654 aaKnown RBP4.87□□□□□ -1.63
SEC22A-204ENST00000473494 FOLR2P14207 255 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 UQCRBP14927 111 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 PVRP15151 417 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 ADSSP30520 456 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 RAB35Q15286 201 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 SLC25A24Q6NUK1 477 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 PRSS48Q7RTY5 328 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 TOMM40LQ969M1 308 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 CASD1Q96PB1 797 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 RPP25Q9BUL9 199 aaKnown RBP4.87□□□□□ -1.63
SEC22A-204ENST00000473494 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.87□□□□□ -1.63
SEC22A-204ENST00000473494 ZNF581Q9P0T4 197 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 SENP1Q9P0U3 644 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 NTNG1Q9Y2I2 539 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 NUP155O75694 1391 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 MED14O60244 1454 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 SLIT1O75093 1534 aa4.87□□□□□ -1.63
SEC22A-204ENST00000473494 TMEM131LA2VDJ0 1609 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 HMMRO75330 724 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 GSTT2P0CG29 244 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 GSTT2BP0CG30 244 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 SHC1P29353 583 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 KRTAP10-9P60411 292 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 RPS6P62753 249 aaKnown RBP4.86□□□□□ -1.63
SEC22A-204ENST00000473494 CNPY1Q3B7I2 92 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 SULT1C3Q6IMI6 304 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 GALNT17Q6IS24 598 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 BTNL3Q6UXE8 466 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 CCBE1Q6UXH8 406 aaPredicted RBP4.86□□□□□ -1.63
SEC22A-204ENST00000473494 CENPUQ71F23 418 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 Q7L0L9 218 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 LCA5Q86VQ0 697 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 SLC22A18ASQ8N1D0 253 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 ZNF485Q8NCK3 441 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 OR6T1Q8NGN1 323 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 OR10T2Q8NGX3 314 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 ART4Q93070 314 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 RAB7BQ96AH8 199 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 DNAJA3Q96EY1 480 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 PIWIL1Q96J94 861 aaKnown RBP4.86□□□□□ -1.63
SEC22A-204ENST00000473494 C1orf147Q96MC9 270 aaPredicted RBP4.86□□□□□ -1.63
SEC22A-204ENST00000473494 C9orf85Q96MD7 179 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 FEM1AQ9BSK4 669 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 CLEC5AQ9NY25 188 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 LAMP5Q9UJQ1 280 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 CHMP2BQ9UQN3 213 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 SF3B1O75533 1304 aaKnown RBP eCLIP4.86□□□□□ -1.632e-6■■■■■ 43.1
SEC22A-204ENST00000473494 KANK1Q14678 1352 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 ADGRB3O60242 1522 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 CLTCL1P53675 1640 aa4.86□□□□□ -1.63
SEC22A-204ENST00000473494 TRABD2BA6NFA1 517 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms