RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 PCDHGB4Q9UN71 923 aa13.52□□□□□ -0.25
HOXB3-206ENST00000471459 EDARQ9UNE0 448 aa13.52□□□□□ -0.25
HOXB3-206ENST00000471459 RAP2CQ9Y3L5 183 aa13.52□□□□□ -0.25
HOXB3-206ENST00000471459 PHF3Q92576 2039 aaKnown RBP13.52□□□□□ -0.25
HOXB3-206ENST00000471459 CACNA1CQ13936 2221 aa13.52□□□□□ -0.25
HOXB3-206ENST00000471459 NBPF19A0A087WUL8 3843 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 CLCA1A8K7I4 914 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 SCDO00767 359 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 RCBTB2O95199 551 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 LAMP1P11279 417 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 EFNA1P20827 205 aaPredicted RBP13.51□□□□□ -0.25
HOXB3-206ENST00000471459 SLC1A6P48664 564 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 LHX2P50458 406 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 RPL14P50914 215 aaKnown RBP13.51□□□□□ -0.25
HOXB3-206ENST00000471459 ZNF136P52737 540 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 DIO3P55073 304 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 POU6F2P78424 691 aaPredicted RBP13.51□□□□□ -0.25
HOXB3-206ENST00000471459 STX3Q13277 289 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 PTGR1Q14914 329 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.51□□□□□ -0.25
HOXB3-206ENST00000471459 PGS1Q32NB8 556 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 FBXL19-AS1Q494R0 122 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 OR2A2Q6IF42 318 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 MISPQ8IVT2 679 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 SLC16A11Q8NCK7 471 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 NAXEQ8NCW5 288 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 VPS37AQ8NEZ2 397 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 ADAMTS15Q8TE58 950 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 COQ8BQ96D53 544 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 FAM120BQ96EK7 910 aaKnown RBP13.51□□□□□ -0.25
HOXB3-206ENST00000471459 PGM2Q96G03 612 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 UCN2Q96RP3 112 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 YIPF4Q9BSR8 244 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 SFXN3Q9BWM7 321 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 BTBD2Q9BX70 525 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 BHLHE41Q9C0J9 482 aaPredicted RBP13.51□□□□□ -0.25
HOXB3-206ENST00000471459 NEUROD4Q9HD90 331 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 GIN1Q9NXP7 522 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 GIMAP2Q9UG22 337 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 ITGB1BP2Q9UKP3 347 aa13.51□□□□□ -0.25
HOXB3-206ENST00000471459 H3BNH8 94 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 KCNK2O95069 426 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 HMGN2P05204 90 aaKnown RBP13.5□□□□□ -0.25
HOXB3-206ENST00000471459 NGFRP08138 427 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 ACP2P11117 423 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 ZNF708P17019 499 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 TBXA2RP21731 343 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 MAP3K8P41279 467 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 AGFG1P52594 562 aaKnown RBP13.5□□□□□ -0.25
HOXB3-206ENST00000471459 DLX5P56178 289 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 CLDN8P56748 225 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 RPS3AP61247 264 aaKnown RBP13.5□□□□□ -0.25
HOXB3-206ENST00000471459 PDCD2Q16342 344 aaPredicted RBP13.5□□□□□ -0.25
HOXB3-206ENST00000471459 DUSP5Q16690 384 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 GRAMD1BQ3KR37 738 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 FIGNL1Q6PIW4 674 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 UBQLNLQ8IYU4 475 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 C9orf106Q8NAJ2 232 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 ZNF527Q8NB42 609 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 FBXO30Q8TB52 745 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 FAM222BQ8WU58 562 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 HOXB13Q92826 284 aaPredicted RBP13.5□□□□□ -0.25
HOXB3-206ENST00000471459 INTS12Q96CB8 462 aaKnown RBP13.5□□□□□ -0.25
HOXB3-206ENST00000471459 C1GALT1C1Q96EU7 318 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 C16orf58Q96GQ5 468 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 STACQ99469 402 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 DUSP26Q9BV47 211 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 ACTRT3Q9BYD9 372 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 HOXD1Q9GZZ0 328 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 PIGMQ9H3S5 423 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 PIGUQ9H490 435 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 DUSP22Q9NRW4 184 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 L3MBTL1Q9Y468 752 aa13.5□□□□□ -0.25
HOXB3-206ENST00000471459 APCP25054 2843 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 A0A087WZY1 265 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 TUBAL3A6NHL2 446 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 KDM4EB2RXH2 506 aaPredicted RBP13.49□□□□□ -0.25
HOXB3-206ENST00000471459 ALG1L2C9J202 215 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 ITM2AO43736 263 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 CRHP06850 196 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 G6PDP11413 515 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 ARRB2P32121 409 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 CPA2P48052 419 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 ZNF41P51814 821 aaPredicted RBP13.49□□□□□ -0.25
HOXB3-206ENST00000471459 CLDN18P56856 261 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 LASP1Q14847 261 aaKnown RBP13.49□□□□□ -0.25
HOXB3-206ENST00000471459 SGCBQ16585 318 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 FBXW10Q5XX13 1052 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 CDH24Q86UP0 819 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 KRTCAP2Q8N6L1 136 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 ZNF781Q8N8C0 355 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 RELL2Q8NC24 303 aaPredicted RBP13.49□□□□□ -0.25
HOXB3-206ENST00000471459 OR4C3Q8NH37 302 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 FAM110BQ8TC76 370 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 GIMAP5Q96F15 307 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 PPP1R36Q96LQ0 422 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 ASIC5Q9NY37 505 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 FLRT3Q9NZU0 649 aa13.49□□□□□ -0.25
HOXB3-206ENST00000471459 ZNF337Q9Y3M9 751 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms