RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 NLGN4YQ8NFZ3 816 aaPredicted RBP16.22■□□□□ 0.19
HSPG2-208ENST00000471322 OR52R1Q8NGF1 315 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 GPR151Q8TDV0 419 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 ALPK1Q96QP1 1244 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 FEVQ99581 238 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 DPH1Q9BZG8 443 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 GRIP2Q9C0E4 1043 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 SLC7A5P2Q9GIP4 190 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 FAM192AQ9GZU8 254 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 ZNF350Q9GZX5 532 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 RIBC2Q9H4K1 309 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 PAPOLBQ9NRJ5 636 aaKnown RBP16.22■□□□□ 0.19
HSPG2-208ENST00000471322 SRPK3Q9UPE1 567 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 POFUT2Q9Y2G5 429 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 TMEM184BQ9Y519 407 aaPredicted RBP16.22■□□□□ 0.19
HSPG2-208ENST00000471322 ZFYVE26Q68DK2 2539 aa16.22■□□□□ 0.19
HSPG2-208ENST00000471322 SYNDIG1LA6NDD5 238 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 BCKDKO14874 412 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 MITFO75030 526 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 SEC24DO94855 1032 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 NKX2-2O95096 273 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 THBS1P07996 1170 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 S1PR1P21453 382 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 IFNA8P32881 189 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 PIGAP37287 484 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 POU6F2P78424 691 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 IL1RL1Q01638 556 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 DUSP8Q13202 625 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 ERV3-1Q14264 604 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 GANABQ14697 944 aaKnown RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 EXOSC7Q15024 291 aaKnown RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 DCST2Q5T1A1 773 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 ZNF691Q5VV52 312 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 TYW3Q6IPR3 259 aaKnown RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 C6orf15Q6UXA7 325 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 WDR53Q7Z5U6 358 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 GALNT5Q7Z7M9 940 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 SLC5A8Q8N695 610 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 METTL27Q8N6F8 245 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 VANGL1Q8TAA9 524 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 CLIP3Q96DZ5 547 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 ARHGDIGQ99819 225 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 APOL4Q9BPW4 351 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 LMF2Q9BU23 707 aaKnown RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 YIPF2Q9BWQ6 316 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 RSPO3Q9BXY4 272 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-208ENST00000471322 GABARAPL3Q9BY60 117 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 SAP130Q9H0E3 1048 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 ZNF304Q9HCX3 659 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 NDUFA13Q9P0J0 144 aa16.21■□□□□ 0.19
HSPG2-208ENST00000471322 SEC16AO15027 2179 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 A0A087WXM4 84 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 LOC101059948A0A1B0GTJ6 334 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 A0A1B0GX78 115 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 TRIM64A6NGJ6 449 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 FAAHO00519 579 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 FFAR1O14842 300 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 EFSO43281 561 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 DYRK3O43781 588 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 FCMRO60667 390 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 PRAMEF2O60811 474 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 CDC123O75794 336 aaPredicted RBP16.2■□□□□ 0.18
HSPG2-208ENST00000471322 UGT2B17O75795 530 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 WT1P19544 449 aaPredicted RBP16.2■□□□□ 0.18
HSPG2-208ENST00000471322 GABRA3P34903 492 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 BTG2P78543 158 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 ZNF155Q12901 538 aaPredicted RBP16.2■□□□□ 0.18
HSPG2-208ENST00000471322 NPRL3Q12980 569 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 TOP3AQ13472 1001 aaPredicted RBP16.2■□□□□ 0.18
HSPG2-208ENST00000471322 APOFQ13790 326 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 EIPR1Q53HC9 387 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 RBM48Q5RL73 367 aaKnown RBP16.2■□□□□ 0.18
HSPG2-208ENST00000471322 DCST1Q5T197 706 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 C1orf189Q5VU69 101 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 BPHLQ86WA6 291 aaPredicted RBP16.2■□□□□ 0.18
HSPG2-208ENST00000471322 ZNF619Q8N2I2 560 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 SIMC1Q8NDZ2 872 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 FNDC11Q9BVV2 318 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 EVA1AQ9H8M9 152 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 LANCL2Q9NS86 450 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 DHCR7Q9UBM7 475 aaKnown RBP16.2■□□□□ 0.18
HSPG2-208ENST00000471322 CLDN16Q9Y5I7 305 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 MAU2Q9Y6X3 613 aa16.2■□□□□ 0.18
HSPG2-208ENST00000471322 A0A1W2PRQ8 180 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 AGAP5A6NIR3 686 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 PCDH17O14917 1159 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 CPNE3O75131 537 aaKnown RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 IFNA16P05015 189 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 DBIP07108 87 aaKnown RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 MAOAP21397 527 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 FBLP22087 321 aaKnown RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 NR1H2P55055 460 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 FUT7Q11130 342 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 DGCR6Q14129 220 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 COL28A1Q2UY09 1125 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 LCN10Q6JVE6 187 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 DGAT2L6Q6ZPD8 337 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 QSOX2Q6ZRP7 698 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 OLIG3Q7RTU3 272 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms