RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 NSD1Q96L73 2696 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-208ENST00000470076 RGS14O43566 566 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 FCGR2AP12318 317 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 POU2F1P14859 743 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 GPC1P35052 558 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 UGT2B10P36537 528 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 HSPB3Q12988 150 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 PON3Q15166 354 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 LIPMQ5VYY2 423 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 SHEQ5VZ18 495 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 CLEC6AQ6EIG7 209 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 BIVMQ86UB2 503 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 TDRPQ86YL5 185 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 METTL25Q8N6Q8 603 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 CEP70Q8NHQ1 597 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 ZFP28Q8NHY6 868 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 GPR151Q8TDV0 419 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 HOXB13Q92826 284 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-208ENST00000470076 CCT7Q99832 543 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 MED18Q9BUE0 208 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 OPN3Q9H1Y3 402 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-208ENST00000470076 LRTM1Q9HBL6 345 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 EQTNQ9NQ60 294 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 KLHL28Q9NXS3 571 aa15.74■□□□□ 0.11
COL7A1-208ENST00000470076 C6orf203Q9P0P8 240 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-208ENST00000470076 GXYLT2A0PJZ3 443 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 C16orf97H3BN30 126 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 COPEO14579 308 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 TBX19O60806 448 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 NKX2-2O95096 273 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 CGAP01215 116 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 IGKV1D-16P01601 117 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 NEFHP12036 1026 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 CRYGSP22914 178 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 MAP3K8P41279 467 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 KCNJ5P48544 419 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 NKX6-1P78426 367 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-208ENST00000470076 SGCBQ16585 318 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 TMEM44Q2T9K0 475 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 GRAMD1BQ3KR37 738 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 APOOLQ6UXV4 268 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 RNF165Q6ZSG1 346 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 CXorf67Q86X51 503 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-208ENST00000470076 HOMEZQ8IX15 550 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 EIF1ADQ8N9N8 165 aaKnown RBP15.73■□□□□ 0.11
COL7A1-208ENST00000470076 CDRT4Q8N9R6 151 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 PIK3R3Q92569 461 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 PPCDCQ96CD2 204 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 ZBED6CLQ96FA7 236 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-208ENST00000470076 C18orf12Q96KH6 178 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 FCRL1Q96LA6 429 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 REEP4Q9H6H4 257 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 NTMQ9P121 344 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 MID2Q9UJV3 735 aa15.73■□□□□ 0.11
COL7A1-208ENST00000470076 ABCA2Q9BZC7 2435 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 DEFB108AA8MXU0 73 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 ALG1L2C9J202 215 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 AZIN1O14977 448 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 ARHGEF9O43307 516 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 SHBGP04278 402 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 NGFRP08138 427 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 ZNF17P17021 662 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 CCKARP32238 428 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 GUSBP1Q15486 140 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 ANKRD26P1Q6NSI1 321 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 Q6ZSR9 355 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 FAM214BQ7L5A3 538 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 KRTAP1-3Q8IUG1 177 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 GSPT2Q8IYD1 628 aaKnown RBP15.72■□□□□ 0.11
COL7A1-208ENST00000470076 NUP43Q8NFH3 380 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 PIGTQ969N2 578 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 CIDECQ96AQ7 238 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-208ENST00000470076 PIP5K1AQ99755 562 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 TRMOQ9BU70 441 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 ACSS1Q9NUB1 689 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-208ENST00000470076 PAQR5Q9NXK6 330 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-208ENST00000470076 PROCRQ9UNN8 238 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 PTGDR2Q9Y5Y4 395 aa15.72■□□□□ 0.11
COL7A1-208ENST00000470076 A0A087WZY1 265 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 SIAH2O43255 324 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 NDUFB5O43674 189 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 CHEK2O96017 543 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 SDC1P18827 310 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 KRT4P19013 534 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 FRKP42685 505 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-208ENST00000470076 PRKAG1P54619 331 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 MANFP55145 182 aaKnown RBP15.71■□□□□ 0.11
COL7A1-208ENST00000470076 PDE7AQ13946 482 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 ZNF385BQ569K4 471 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 GGNQ86UU5 652 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 EXOC3L1Q86VI1 746 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 LRRC75A-AS1Q8N1F1 130 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 ZNF610Q8N9Z0 462 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 OR6Y1Q8NGX8 325 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 OR2T11Q8NH01 316 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 OR4C3Q8NH37 302 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 UBLCP1Q8WVY7 318 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-208ENST00000470076 SLC9A6Q92581 669 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 CAVIN3Q969G5 261 aa15.71■□□□□ 0.11
COL7A1-208ENST00000470076 PIK3IP1Q96FE7 263 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms