RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TRIM2Q9C040 744 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 MANSC1Q9H8J5 431 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 CHODLQ9H9P2 273 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 SNX12Q9UMY4 172 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 DPRXA6NFQ7 191 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 RAMP1O60894 148 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 GALNT1Q10472 559 aaPredicted RBP16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 ACAP2Q15057 778 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 RAB35Q15286 201 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 DECR1Q16698 335 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 PDSS1Q5T2R2 415 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 SFRP5Q5T4F7 317 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 KLC3Q6P597 504 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 PIWIL2Q8TC59 973 aaKnown RBP16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 ROBO4Q8WZ75 1007 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 HTRA1Q92743 480 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 CACNG6Q9BXT2 260 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 TMEM185BQ9H7F4 350 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 FARSBQ9NSD9 589 aaKnown RBP16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 NMRK1Q9NWW6 199 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 FAM120CQ9NX05 1096 aaKnown RBP16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 MRTO4Q9UKD2 239 aaKnown RBP16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 SNX24Q9Y343 169 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 FREM1Q5H8C1 2179 aa16.88■□□□□ 0.29
NCKIPSD-209ENST00000470006 A0A096LNT2 108 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 GCM2O75603 506 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 ADAP00813 363 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 SLC25A16P16260 332 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 TRA2BP62995 288 aaKnown RBP16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 C17orf67Q0P5P2 114 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 STK11Q15831 433 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 CYP27C1Q4G0S4 372 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 HBMQ6B0K9 141 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 DTX2Q86UW9 622 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 EXOC3L1Q86VI1 746 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 CENPLQ8N0S6 344 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 C1orf52Q8N6N3 182 aaKnown RBP16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 PTGR2Q8N8N7 351 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 BANPQ8N9N5 519 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 OR2V1Q8NHB1 315 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 SELENOMQ8WWX9 145 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 FAM168AQ92567 244 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 PHF21BQ96EK2 531 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 KCNS2Q9ULS6 477 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 MALRD1Q5VYJ5 2156 aa16.87■□□□□ 0.29
NCKIPSD-209ENST00000470006 TP73O15350 636 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 COQ9O75208 318 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 ANGPTL1O95841 491 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 PDYNP01213 254 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 PABPC4LP0CB38 370 aaKnown RBP16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 ME2P23368 584 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 IRX1P78414 480 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 GAS2L3Q86XJ1 694 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 SAMD14Q8IZD0 417 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 FAM9CQ8IZT9 166 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 GABRG1Q8N1C3 465 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 ZNF525Q8N782 197 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 OR7G2Q8NG99 324 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 OR2W6PQ8NHA6 318 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 SLC9A6Q92581 669 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 BBS4Q96RK4 519 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 GRIP2Q9C0E4 1043 aa16.86■□□□□ 0.29
NCKIPSD-209ENST00000470006 ELOA3DA6NLF2 546 aaPredicted RBP16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 C2P06681 752 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 IL3P08700 152 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 IGHV4-31P0DP07 118 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 ZNF17P17021 662 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 HNF1AP20823 631 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 MPIP34949 423 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 PSMD4P55036 377 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 CARD18P57730 90 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 PSG6Q00889 435 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 ELOA3BQ3SY89 546 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 METTL2BQ6P1Q9 378 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 ESPNLQ6ZVH7 1005 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 BHLHA15Q7RTS1 189 aaPredicted RBP16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 NUFIP2Q7Z417 695 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 LRRC8AQ8IWT6 810 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 ELOA3Q8NG57 546 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 OR4F6Q8NGB9 312 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 OSTF1Q92882 214 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 NSUN5Q96P11 429 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 POTEKPQ9BYX7 375 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 Q9N2J8 555 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 POU2F3Q9UKI9 436 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 SVEP1Q4LDE5 3571 aa16.85■□□□□ 0.29
NCKIPSD-209ENST00000470006 GNG14A0A1W2PPG7 69 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 CCDC189A1A4V9 331 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 ABCD4O14678 606 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 PLOD3O60568 738 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 UTS2O95399 124 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 CTAGE8P0CG41 777 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 USF1P22415 310 aaPredicted RBP16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 IGFBP5P24593 272 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 RAC1P63000 192 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 CSTF3Q12996 717 aaKnown RBP16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 TRAF3Q13114 568 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 PPA1Q15181 289 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 ZNHIT3Q15649 155 aaPredicted RBP16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 TMEM44Q2T9K0 475 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms