RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 NEU3Q9UQ49 428 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 TDRD6O60522 2096 aaKnown RBP9.36□□□□□ -0.91
NUP50-214ENST00000469163 A0A096LPI6 279 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 A0A0J9YYE9 177 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 ISM1B1AKI9 464 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 LYRM1O43325 122 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 CIDEAO60543 219 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 SERPINA1P01009 418 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 TRBC1P01850 177 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 SYPP08247 313 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 C21orf33P30042 268 aaPredicted RBP9.36□□□□□ -0.91
NUP50-214ENST00000469163 CCR7P32248 378 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 PPT1P50897 306 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 PDZK1IP1Q13113 114 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 ZNF691Q5VV52 312 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 PTCRAQ6ISU1 281 aaPredicted RBP9.36□□□□□ -0.91
NUP50-214ENST00000469163 RPL13AP3Q6NVV1 102 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 NCEH1Q6PIU2 408 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 TMEM135Q86UB9 458 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 KLBQ86Z14 1044 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 MFSD6LQ8IWD5 586 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 PELI3Q8N2H9 469 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 RNF175Q8N4F7 328 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 SETD9Q8NE22 299 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 STYXQ8WUJ0 223 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 ZNF559Q9BR84 538 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 UGT2B28Q9BY64 529 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 GOLT1BQ9Y3E0 138 aa9.36□□□□□ -0.91
NUP50-214ENST00000469163 TUBAL3A6NHL2 446 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 ANXA2P2A6NMY6 339 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 HSPA12AO43301 675 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 PROM1O43490 865 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 CD160O95971 181 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 CST1P01037 141 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 IGLV3-27P01718 113 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 SBK2P0C263 348 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 ANXA7P20073 488 aaKnown RBP9.35□□□□□ -0.91
NUP50-214ENST00000469163 C4BPBP20851 252 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 CNTFP26441 200 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 MAP3K8P41279 467 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 RGS4P49798 205 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 SF1Q15637 639 aaKnown RBP9.35□□□□□ -0.91
NUP50-214ENST00000469163 ZNHIT3Q15649 155 aaPredicted RBP9.35□□□□□ -0.91
NUP50-214ENST00000469163 VPS26BQ4G0F5 336 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 FAM98BQ52LJ0 330 aaKnown RBP9.35□□□□□ -0.91
NUP50-214ENST00000469163 TMEM35AQ53FP2 167 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 KLHL22Q53GT1 634 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 NHLRC3Q5JS37 347 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 GPRC6AQ5T6X5 926 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 ELP2Q6IA86 826 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 ZNF613Q6PF04 617 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 PROSER1Q86XN7 944 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 LRRC18Q8N456 261 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 OVCA2Q8WZ82 227 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 TSPAN17Q96FV3 270 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 OTUB1Q96FW1 271 aaPredicted RBP9.35□□□□□ -0.91
NUP50-214ENST00000469163 NSMCE2Q96MF7 247 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 MGME1Q9BQP7 344 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 CD207Q9UJ71 328 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 CHTOPQ9Y3Y2 248 aaKnown RBP9.35□□□□□ -0.91
NUP50-214ENST00000469163 TMEM202A6NGA9 273 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 B4E171 279 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 TSPAN6O43657 245 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 DIRAS3O95661 229 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 CTSLP07711 333 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 SLC35E2BP0CK96 405 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 NQO2P16083 231 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 ENGP17813 658 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 TTPAP49638 278 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 ANXA11P50995 505 aaKnown RBP9.35□□□□□ -0.91
NUP50-214ENST00000469163 ZNF77Q15935 545 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 PAPD4Q6PIY7 484 aaKnown RBP9.35□□□□□ -0.91
NUP50-214ENST00000469163 BLOC1S3Q6QNY0 202 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 FAM198BQ6UWH4 519 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 GPR149Q86SP6 731 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 ATP6V1C2Q8NEY4 427 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 FAM45AQ8TCE6 357 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 LKAAEAR1Q8TD35 194 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 NUDT8Q8WV74 236 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 TSACCQ96A04 125 aaPredicted RBP9.35□□□□□ -0.91
NUP50-214ENST00000469163 EID2BQ96D98 161 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 PINK1Q9BXM7 581 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 DPEP2Q9H4A9 486 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 DUSP21Q9H596 190 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 FOLH1BQ9HBA9 442 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 C19orf12Q9NSK7 152 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 GAB2Q9UQC2 676 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 C1QTNF3-AMACRE9PGA6 284 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 H7C1Q1 480 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 PIP5K1CO60331 668 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 SLC43A1O75387 559 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 H2AFB1P0C5Y9 115 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 H2AFB2P0C5Z0 115 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 LCN1P31025 176 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 S100A7P31151 101 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 BDKRB1P46663 353 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 NFATC2Q13469 925 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 RABL3Q5HYI8 236 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 KCTD11Q693B1 232 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 VHLLQ6RSH7 139 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms