RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 OVGP1Q12889 678 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 CRMP1Q14194 572 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 RAB35Q15286 201 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 UBE2V2Q15819 145 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 CNPY1Q3B7I2 92 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 DCAF4L1Q3SXM0 396 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 ZNF311Q5JNZ3 666 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 SEL1L3Q68CR1 1132 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 ASPHD2Q6ICH7 369 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 GALNT17Q6IS24 598 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 LRRC8BQ6P9F7 803 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 CBLN3Q6UW01 205 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 TMEM184AQ6ZMB5 413 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 CENPLQ8N0S6 344 aaPredicted RBP3.96□□□□□ -1.78
LSM5-209ENST00000468872 SLC22A18ASQ8N1D0 253 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 FADS6Q8N9I5 356 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 TBCKQ8TEA7 893 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 UPRTQ96BW1 309 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 GPA33Q99795 319 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 WDR76Q9H967 626 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 CGNQ9P2M7 1197 aaKnown RBP3.96□□□□□ -1.78
LSM5-209ENST00000468872 CCDC7Q96M83 1385 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 ATP10AO60312 1499 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 WIZO95785 1651 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 SZT2Q5T011 3432 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 DLC1Q96QB1 1528 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 POLR1AO95602 1720 aaPredicted RBP3.95□□□□□ -1.78
LSM5-209ENST00000468872 DIP2AQ14689 1571 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 LRRC9Q6ZRR7 1453 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 ARHGAP23Q9P227 1491 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 METP08581 1390 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 TRAV9-2A0A087WT02 112 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 SAP18O00422 153 aaKnown RBP3.95□□□□□ -1.78
LSM5-209ENST00000468872 NDC80O14777 642 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 ZNF253O75346 499 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 CHRNA1P02708 482 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 TSPY4P0CV99 314 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 TSPY10P0CW01 314 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 HSPA5P11021 654 aaKnown RBP3.95□□□□□ -1.78
LSM5-209ENST00000468872 KRT13P13646 458 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 GATA1P15976 413 aaPredicted RBP3.95□□□□□ -1.78
LSM5-209ENST00000468872 NAPAP54920 295 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 RPS6P62753 249 aaKnown RBP3.95□□□□□ -1.78
LSM5-209ENST00000468872 ELP6Q0PNE2 266 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 LINC01620Q4KN68 170 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 ARMCX2Q7L311 632 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 HIPK1Q86Z02 1210 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 STKLD1Q8NE28 680 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 OR5AU1Q8NGC0 362 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 RFESDQ8TAC1 157 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 DHTKD1Q96HY7 919 aaPredicted RBP3.95□□□□□ -1.78
LSM5-209ENST00000468872 MCCC1Q96RQ3 725 aaPredicted RBP3.95□□□□□ -1.78
LSM5-209ENST00000468872 PUS3Q9BZE2 481 aaKnown RBP3.95□□□□□ -1.78
LSM5-209ENST00000468872 MEPEQ9NQ76 525 aaPredicted RBP3.95□□□□□ -1.78
LSM5-209ENST00000468872 RBM28Q9NW13 759 aaKnown RBP3.95□□□□□ -1.78
LSM5-209ENST00000468872 RDH8Q9NYR8 311 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 TMOD2Q9NZR1 351 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 ZNF581Q9P0T4 197 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 LAMP5Q9UJQ1 280 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 KIF3AQ9Y496 699 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 AP4B1Q9Y6B7 739 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 BIVM-ERCC5R4GMW8 1640 aa3.95□□□□□ -1.78
LSM5-209ENST00000468872 TMEM94Q12767 1356 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 TRBV7-9A0A0J9YWB2 115 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 ZSCAN5CA6NGD5 496 aaPredicted RBP3.94□□□□□ -1.78
LSM5-209ENST00000468872 CASKO14936 926 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 KBTBD11O94819 623 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 FAM200BP0CF97 657 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 UQCRBP14927 111 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 ACADSP16219 412 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 GATA2P23769 480 aaPredicted RBP3.94□□□□□ -1.78
LSM5-209ENST00000468872 METAP1P53582 386 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 PPP1R3AQ16821 1122 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 USH1GQ495M9 461 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 TMEM52BQ4KMG9 183 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 CYBRD1Q53TN4 286 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 SLX4IPQ5VYV7 408 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 SLC25A24Q6NUK1 477 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 RAB7BQ96AH8 199 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 TADA1Q96BN2 335 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 FAM122AQ96E09 287 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 ELMO2Q96JJ3 720 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 C4orf36Q96KX1 117 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 C9orf85Q96MD7 179 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 SLC25A51Q9H1U9 297 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 COG4Q9H9E3 785 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 FAM120CQ9NX05 1096 aaKnown RBP3.94□□□□□ -1.78
LSM5-209ENST00000468872 CLEC5AQ9NY25 188 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 UTP6Q9NYH9 597 aaKnown RBP3.94□□□□□ -1.78
LSM5-209ENST00000468872 PRODH2Q9UF12 536 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 BARX2Q9UMQ3 279 aaPredicted RBP3.94□□□□□ -1.78
LSM5-209ENST00000468872 NTNG1Q9Y2I2 539 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 HECW1Q76N89 1606 aa3.94□□□□□ -1.78
LSM5-209ENST00000468872 MAGI2Q86UL8 1455 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 ADCY9O60503 1353 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 COL6A3P12111 3177 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 DNMT1P26358 1616 aaKnown RBP3.93□□□□□ -1.78
LSM5-209ENST00000468872 ZNF840PA6NDX5 716 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 CCT8L1PA6NM43 557 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 E9PAM4 449 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms