RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, human

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC16A-208	ENST00000467838	GFM1	Q96RP9	751 aa	Known RBP	13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	GHITM	Q9H3K2	345 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	ATP13A2	Q9NQ11	1180 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	SLC23A1	Q9UHI7	598 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	ELF5	Q9UKW6	265 aa	Predicted RBP	13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	NCKAP1	Q9Y2A7	1128 aa		13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838	MDC1	Q14676	2089 aa	Known RBP	13.55	□□□□□ -0.24
SEC16A-208	ENST00000467838		A0A0A6YYJ9	748 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838		A0A0G2JN53	185 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	EDDM13	A0A1B0GTR0	161 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	SOCS6	O14544	535 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	SLC9A3R1	O14745	358 aa	Predicted RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	LANCL1	O43813	399 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	RFPL3	O75679	317 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	AIFM1	O95831	613 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	CH25H	O95992	272 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	PAH	P00439	452 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	NDUFV2	P19404	249 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	HIST1H1T	P22492	207 aa	Predicted RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	CA8	P35219	290 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	GPR4	P46093	362 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	AP2S1	P53680	142 aa	Predicted RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	PRKAG1	P54619	331 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	PRDX1	Q06830	199 aa	Known RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	DHCR24	Q15392	516 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	FAM214A	Q32MH5	1076 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	HEPHL1	Q6MZM0	1159 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	CXXC5	Q7LFL8	322 aa	Known RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	RRM2B	Q7LG56	351 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	GDF7	Q7Z4P5	450 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	NRM	Q8IXM6	262 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	ACBD7	Q8N6N7	88 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	KLK6	Q92876	244 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	INPP5E	Q9NRR6	644 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	IMP3	Q9NV31	184 aa	Known RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	BABAM2	Q9NXR7	383 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	GPSM3	Q9Y4H4	160 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838		A0A0G2JK05	382 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	LINC00862	A6NCI5	91 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	LEUTX	A8MZ59	168 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	PGRMC2	O15173	223 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	SHOX	O15266	292 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	NOS1AP	O75052	506 aa	Predicted RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	EIF4E	P06730	217 aa	Known RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	ALPPL2	P10696	532 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	F3	P13726	295 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	M6PR	P20645	277 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	WEE1	P30291	646 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	BCL6	P41182	706 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	TGM3	Q08188	693 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	LRRC32	Q14392	662 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	FCN2	Q15485	313 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	TRAM1	Q15629	374 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	HSD17B12	Q53GQ0	312 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	IDNK	Q5T6J7	187 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	ANKRD54	Q6NXT1	300 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	SLC48A1	Q6P1K1	146 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	ABHD17C	Q6PCB6	329 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	PLEKHM3	Q6ZWE6	761 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	RFPL4B	Q6ZWI9	263 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	TPRA1	Q86W33	373 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	C12orf40	Q86WS4	652 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	SUN5	Q8TC36	379 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	GANC	Q8TET4	914 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	MS4A6E	Q96DS6	147 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	GIMAP5	Q96F15	307 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	SLC41A3	Q96GZ6	507 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	THAP7	Q9BT49	309 aa	Predicted RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	HDHD2	Q9H0R4	259 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	KLHL31	Q9H511	634 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	ISG20L2	Q9H9L3	353 aa	Known RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	ZFP64	Q9NPA5	681 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	PRDM7	Q9NQW5	492 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	ENAM	Q9NRM1	1142 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	KLHL28	Q9NXS3	571 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	ZFR2	Q9UPR6	939 aa	Known RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	TMA7	Q9Y2S6	64 aa	Known RBP	13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	ATG4B	Q9Y4P1	393 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	CACNG2	Q9Y698	323 aa		13.54	□□□□□ -0.24
SEC16A-208	ENST00000467838	MYO10	Q9HD67	2058 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	GSAP	A4D1B5	854 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	PRR23A	A6NEV1	266 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	FABP7	O15540	132 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	PIP5K1C	O60331	668 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	SC5D	O75845	299 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	SLC2A10	O95528	541 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	RHO	P08100	348 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	LINC00271	P0C7V0	271 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	CSNK2A2	P19784	350 aa	Predicted RBP	13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	AHCY	P23526	432 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	F8A1	P23610	371 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	ATP5A1	P25705	553 aa	Known RBP	13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	TALDO1	P37837	337 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	GCGR	P47871	477 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	PITPNB	P48739	271 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	PER3	P56645	1201 aa		13.53	□□□□□ -0.24
SEC16A-208	ENST00000467838	RGS8	P57771	180 aa	Predicted RBP	13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms