RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 AURKCQ9UQB9 309 aa4.11□□□□□ -1.75
PTCD3-205ENST00000464541 EIF3LQ9Y262 564 aaKnown RBP4.11□□□□□ -1.75
PTCD3-205ENST00000464541 RGSL1A5PLK6 1076 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 TMEM110-MUSTN1A8MSY1 372 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 SNX4O95219 450 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 IGHV3-23P01764 117 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 OPN1MWP04001 364 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 OPN1MW2P0DN77 364 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 OPN1MW3P0DN78 364 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 CCDC192P0DO97 292 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 ARF4P18085 180 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-205ENST00000464541 ELK1P19419 428 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 UGT1A3P35503 534 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 SLC26A2P50443 739 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 STARD6P59095 220 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 RPL32P62910 135 aaKnown RBP4.1□□□□□ -1.75
PTCD3-205ENST00000464541 PDIA5Q14554 519 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 UFSP1Q6NVU6 142 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 PNCKQ6P2M8 343 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 BTNL3Q6UXE8 466 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 WDR88Q6ZMY6 472 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 CSNK1A1LQ8N752 337 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 ADAMTS16Q8TE57 1224 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 FRAT1Q92837 279 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-205ENST00000464541 ART4Q93070 314 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 TADA1Q96BN2 335 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 TSSK1BQ9BXA7 367 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 EHD1Q9H4M9 534 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 TMEM231Q9H6L2 316 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 POLE3Q9NRF9 147 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 AATFQ9NY61 560 aaKnown RBP eCLIP4.1□□□□□ -1.75
PTCD3-205ENST00000464541 HPCAL4Q9UM19 191 aa4.1□□□□□ -1.75
PTCD3-205ENST00000464541 PIN4Q9Y237 131 aaKnown RBP4.1□□□□□ -1.75
PTCD3-205ENST00000464541 CLRN2A0PK11 232 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 WWP2O00308 870 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 TRIM16O95361 564 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 PGK1P00558 417 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 PRDX2P32119 198 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 ANP32AP39687 249 aaKnown RBP4.09□□□□□ -1.75
PTCD3-205ENST00000464541 WNT4P56705 351 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 STX17P56962 302 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 CAPRIN1Q14444 709 aaKnown RBP4.09□□□□□ -1.75
PTCD3-205ENST00000464541 ZNF57Q68EA5 555 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-205ENST00000464541 IRGCQ6NXR0 463 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 MRPL43Q8N983 215 aaKnown RBP4.09□□□□□ -1.75
PTCD3-205ENST00000464541 NFAM1Q8NET5 270 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-205ENST00000464541 IPMKQ8NFU5 416 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 VPS37BQ9H9H4 285 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 FANCFQ9NPI8 374 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 RBM28Q9NW13 759 aaKnown RBP4.09□□□□□ -1.75
PTCD3-205ENST00000464541 GDAP2Q9NXN4 497 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 CNOT2Q9NZN8 540 aaKnown RBP4.09□□□□□ -1.75
PTCD3-205ENST00000464541 FETUBQ9UGM5 382 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 IL20RAQ9UHF4 553 aa4.09□□□□□ -1.75
PTCD3-205ENST00000464541 CCDC169A6NNP5 214 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 OR7A17O14581 309 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 PPIHO43447 177 aaKnown RBP4.08□□□□□ -1.76
PTCD3-205ENST00000464541 LATO43561 262 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 UBE4BO95155 1302 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 JCHAINP01591 159 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 ALPPP05187 535 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 ALPPL2P10696 532 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 RPA1P27694 616 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 AKT2P31751 481 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 CDH5P33151 784 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-205ENST00000464541 OC90Q02509 493 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-205ENST00000464541 COL16A1Q07092 1604 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-205ENST00000464541 CEP55Q53EZ4 464 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 OR6B2Q6IFH4 312 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 ZNF544Q6NX49 715 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 SCARA5Q6ZMJ2 495 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 STAC2Q6ZMT1 411 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 RGS9BPQ6ZS82 235 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 SLC34A3Q8N130 599 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 RNF148Q8N7C7 305 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 FAM71CQ8NEG0 241 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 BRSK1Q8TDC3 778 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 SHC3Q92529 594 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 ADIPOR1Q96A54 375 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 TMEM80Q96HE8 168 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 CRACR2AQ9BSW2 395 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 TCHPQ9BT92 498 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 NMUR2Q9GZQ4 415 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 DPH5Q9H2P9 285 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 POLD4Q9HCU8 107 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 TRPV5Q9NQA5 729 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.08□□□□□ -1.76
PTCD3-205ENST00000464541 CGNQ9P2M7 1197 aaKnown RBP4.08□□□□□ -1.76
PTCD3-205ENST00000464541 PLA2G4CQ9UP65 541 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 L3MBTL1Q9Y468 752 aa4.08□□□□□ -1.76
PTCD3-205ENST00000464541 K7EPI3 171 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 PES1O00541 588 aaKnown RBP4.07□□□□□ -1.76
PTCD3-205ENST00000464541 ADAM12O43184 909 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 RIPK2O43353 540 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 SMPD2O60906 423 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 PEX11AO75192 247 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 CABYRO75952 493 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 SFTPCP11686 197 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 BCKDHAP12694 445 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 H2AFXP16104 143 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms