RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 ALOX5P09917 674 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 DDX5P17844 614 aaKnown RBP11.76□□□□□ -0.53
XRN1-203ENST00000463916 ZFP36L2P47974 494 aaKnown RBP11.76□□□□□ -0.53
XRN1-203ENST00000463916 LHX2P50458 406 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 PSMD4P55036 377 aaKnown RBP11.76□□□□□ -0.53
XRN1-203ENST00000463916 NME5P56597 212 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 TP53BP2Q13625 1128 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 LSM12Q3MHD2 195 aaKnown RBP11.76□□□□□ -0.53
XRN1-203ENST00000463916 AGBL2Q5U5Z8 902 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 MAVSQ7Z434 540 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 ANKRD46Q86W74 232 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 MCEMP1Q8IX19 187 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 ACBD4Q8NC06 268 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 OR8J2Q8NGG1 315 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 DPY30Q9C005 99 aa11.76□□□□□ -0.53
XRN1-203ENST00000463916 MRPS18CQ9Y3D5 142 aaKnown RBP11.76□□□□□ -0.53
XRN1-203ENST00000463916 HDAC3O15379 428 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 GMFGO60234 142 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 OXSR1O95747 527 aaPredicted RBP11.75□□□□□ -0.53
XRN1-203ENST00000463916 ANGPTL1O95841 491 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 C1QCP02747 245 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 CPN1P15169 458 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 PTGER4P35408 488 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 DSCR4P56555 118 aaPredicted RBP11.75□□□□□ -0.53
XRN1-203ENST00000463916 RPS26P62854 115 aaKnown RBP11.75□□□□□ -0.53
XRN1-203ENST00000463916 SRYQ05066 204 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.75□□□□□ -0.53
XRN1-203ENST00000463916 TTMPQ5BVD1 217 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 OGFOD2Q6N063 350 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 POMZP3Q6PJE2 187 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 PM20D2Q8IYS1 436 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 ZNF295-AS1Q8N0V1 137 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 NATD1Q8N6N6 113 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 COX18Q8N8Q8 333 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 OR4K17Q8NGC6 315 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 OR5M1Q8NGP8 315 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 KLHDC3Q9BQ90 382 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 BTBD2Q9BX70 525 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 TBL1XR1Q9BZK7 514 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 ENKD1Q9H0I2 346 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 PIGUQ9H490 435 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 SERHL2Q9H4I8 314 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 KCNJ16Q9NPI9 418 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 DUSP22Q9NRW4 184 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 DKKL1Q9UK85 242 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 C9JVG2 144 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 ZNF195O14628 629 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 COX6B1P14854 86 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 TBXA2RP21731 343 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 CEACAM8P31997 349 aaPredicted RBP11.75□□□□□ -0.53
XRN1-203ENST00000463916 PRIM2P49643 509 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 UFM1P61960 85 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 SPDYE7PQ495Y7 208 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 SPANXN4Q5MJ08 99 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 RIPPLY2Q5TAB7 128 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 NSUN5P2Q63ZY6 315 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 ATG16L1Q676U5 607 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 CDC73Q6P1J9 531 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 KIRREL3Q8IZU9 778 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 GATSQ8NAP1 163 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 OR56A1Q8NGH5 318 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 OR5D16Q8NGK9 328 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 RAB3IL1Q8TBN0 382 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 ZNF75CPQ92670 426 aaPredicted RBP11.75□□□□□ -0.53
XRN1-203ENST00000463916 CHMP6Q96FZ7 201 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 SFXN2Q96NB2 322 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 TRIB1Q96RU8 372 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 STACQ99469 402 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 TUBA1CQ9BQE3 449 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 ACTRT3Q9BYD9 372 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 TRIM8Q9BZR9 551 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 NEUROD4Q9HD90 331 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 SDHAF3Q9NRP4 125 aa11.75□□□□□ -0.53
XRN1-203ENST00000463916 INTS1Q8N201 2190 aaKnown RBP11.74□□□□□ -0.53
XRN1-203ENST00000463916 IGLV3-32A0A0A0MS00 114 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 ALG1L2C9J202 215 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 RNASET2O00584 256 aaKnown RBP11.74□□□□□ -0.53
XRN1-203ENST00000463916 IGFBP2P18065 325 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 IL12AP29459 219 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 CASP9P55211 416 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 CLDN15P56746 228 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 CLDN18P56856 261 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 POU6F2P78424 691 aaPredicted RBP11.74□□□□□ -0.53
XRN1-203ENST00000463916 C17orf67Q0P5P2 114 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 SLC9B1Q4ZJI4 515 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 ARSKQ6UWY0 536 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 LRRC34Q8IZ02 419 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 ZPLD1Q8TCW7 415 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 TESCQ96BS2 214 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 C1GALT1C1Q96EU7 318 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 ATP6V1G3Q96LB4 118 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 NPAS1Q99742 590 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 AIG1Q9NVV5 245 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 GIN1Q9NXP7 522 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 GPR45Q9Y5Y3 372 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 NPIPA5A0A0B4J1W7 369 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 CD8B2A6NJW9 211 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 SHISA8B8ZZ34 492 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 NPIPA7E9PJI5 369 aa11.74□□□□□ -0.53
XRN1-203ENST00000463916 H0YC42 278 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms