RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 RAET1LQ5VY80 246 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 ZCCHC12Q6PEW1 402 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 PLXDC2Q6UX71 529 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 CDH24Q86UP0 819 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 KRTCAP2Q8N6L1 136 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 ZNF781Q8N8C0 355 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 DUSP19Q8WTR2 217 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 NUDT8Q8WV74 236 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 WNT2BQ93097 391 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 C1GALT1C1Q96EU7 318 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 C16orf58Q96GQ5 468 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 ZFP3Q96NJ6 502 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 ZIM3Q96PE6 472 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 TM9SF2Q99805 663 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 CENPHQ9H3R5 247 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 PTGES2Q9H7Z7 377 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 ZNF395Q9H8N7 513 aaPredicted RBP17.12■□□□□ 0.33
COL5A1-203ENST00000460264 A0A1W2PRB8 838 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 HCRTR2O43614 444 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 KCNK2O95069 426 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 ANGPTL1O95841 491 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 NGFRP08138 427 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 ALOX5P09917 674 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 PRPS1L1P21108 318 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 PEX19P40855 299 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 C17orf67Q0P5P2 114 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 FOXF2Q12947 444 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 MPP2Q14168 576 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 PDCD2Q16342 344 aaPredicted RBP17.11■□□□□ 0.33
COL5A1-203ENST00000460264 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.11■□□□□ 0.33
COL5A1-203ENST00000460264 ZAR1Q86SH2 424 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 RIMKLAQ8IXN7 391 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 OR4C3Q8NH37 302 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 PSMA8Q8TAA3 256 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 FAM110BQ8TC76 370 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 JADE3Q92613 823 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 ZBTB9Q96C00 473 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 COQ8BQ96D53 544 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 LRRC46Q96FV0 321 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 OTUB1Q96FW1 271 aaPredicted RBP17.11■□□□□ 0.33
COL5A1-203ENST00000460264 YIPF4Q9BSR8 244 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 ATAD3AQ9NVI7 634 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 JKAMPQ9P055 326 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 SNX8Q9Y5X2 465 aa17.11■□□□□ 0.33
COL5A1-203ENST00000460264 EEF1E1-BLOC1S5C9J1V9 151 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 ALG1L2C9J202 215 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 EEF1E1O43324 174 aaKnown RBP17.1■□□□□ 0.33
COL5A1-203ENST00000460264 RCBTB2O95199 551 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 ZWINTO95229 277 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 OXSR1O95747 527 aaPredicted RBP17.1■□□□□ 0.33
COL5A1-203ENST00000460264 HMGN2P05204 90 aaKnown RBP17.1■□□□□ 0.33
COL5A1-203ENST00000460264 TUBBP07437 444 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 G6PDP11413 515 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 POU3F2P20265 443 aaPredicted RBP17.1■□□□□ 0.33
COL5A1-203ENST00000460264 KIR2DL3P43628 341 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 PRIM2P49643 509 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 DIO3P55073 304 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 C21orf58P58505 322 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 ABCE1P61221 599 aaKnown RBP17.1■□□□□ 0.33
COL5A1-203ENST00000460264 LASP1Q14847 261 aaKnown RBP17.1■□□□□ 0.33
COL5A1-203ENST00000460264 FIGNL1Q6PIW4 674 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 TMEM200AQ86VY9 491 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 GRAMD2AQ8IUY3 354 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 ZZZ3Q8IYH5 903 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 NATD1Q8N6N6 113 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 COX18Q8N8Q8 333 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 OR5P2Q8WZ92 322 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 SORT1Q99523 831 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 SFXN3Q9BWM7 321 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 C20orf27Q9GZN8 174 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 CXorf36Q9H7Y0 433 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 ASIC5Q9NY37 505 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 CRIM1Q9NZV1 1036 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 FOXD3Q9UJU5 478 aaPredicted RBP17.1■□□□□ 0.33
COL5A1-203ENST00000460264 EIF3LQ9Y262 564 aaKnown RBP17.1■□□□□ 0.33
COL5A1-203ENST00000460264 RAP2CQ9Y3L5 183 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 ACTL7BQ9Y614 415 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 AKAP9Q99996 3911 aa17.1■□□□□ 0.33
COL5A1-203ENST00000460264 TEP1Q99973 2627 aaKnown RBP17.09■□□□□ 0.33
COL5A1-203ENST00000460264 OR2M5A3KFT3 312 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 C6orf47O95873 294 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 PEPDP12955 493 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 TBXA2RP21731 343 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 LCN1P31025 176 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 EMX2Q04743 252 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 MAD2L1Q13257 205 aaPredicted RBP17.09■□□□□ 0.33
COL5A1-203ENST00000460264 SMU1Q2TAY7 513 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 CCNJQ5T5M9 372 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 UBQLNLQ8IYU4 475 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 GCNT2Q8N0V5 402 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 OR5M1Q8NGP8 315 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 GOT1L1Q8NHS2 421 aaPredicted RBP17.09■□□□□ 0.33
COL5A1-203ENST00000460264 INTS12Q96CB8 462 aaKnown RBP17.09■□□□□ 0.33
COL5A1-203ENST00000460264 PGM2Q96G03 612 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 PPP1R36Q96LQ0 422 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 STACQ99469 402 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 PRPF18Q99633 342 aaKnown RBP17.09■□□□□ 0.33
COL5A1-203ENST00000460264 BHLHE41Q9C0J9 482 aaPredicted RBP17.09■□□□□ 0.33
COL5A1-203ENST00000460264 ACBD3Q9H3P7 528 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 DUSP22Q9NRW4 184 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms