RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 COMPP49747 757 aaPredicted RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 GZMKP49863 264 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 DNA2P51530 1060 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 ATP5J2P56134 94 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 SEC61GP60059 68 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 BLOC1S1P78537 153 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 MRPS22P82650 360 aaKnown RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 EFNB1P98172 346 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 ZFP36L1Q07352 338 aaKnown RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 ORC2Q13416 577 aaPredicted RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 ILKQ13418 452 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 ITGA9Q13797 1035 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 HNF4GQ14541 408 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 MTF1Q14872 753 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 PTGR1Q14914 329 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 GSTA3Q16772 222 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 CDO1Q16878 200 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 COX19Q49B96 90 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 CBWD6Q4V339 395 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 TNFAIP8L3Q5GJ75 292 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 SLC25A53Q5H9E4 307 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 CBWD3Q5JTY5 395 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 CTSL3PQ5NE16 218 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 TMEM63BQ5T3F8 832 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 NIPAL1Q6NVV3 410 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 RNASEKQ6P5S7 137 aaKnown RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 PODNL1Q6PEZ8 512 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 ULK3Q6PHR2 472 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 GADL1Q6ZQY3 521 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 C17orf107Q6ZR85 190 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 FAM92BQ6ZTR7 304 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 GDPD3Q7L5L3 318 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 GPRIN1Q7Z2K8 1008 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 TSPAN33Q86UF1 283 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 ADGRG3Q86Y34 549 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 TDRPQ86YL5 185 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 CRLF3Q8IUI8 442 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 FUNDC1Q8IVP5 155 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 GPC2Q8N158 579 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 LILRA3Q8N6C8 439 aaPredicted RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 SIRT6Q8N6T7 355 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 OR2I1PQ8NGU4 316 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 DYNC2LI1Q8TCX1 351 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 PYROXD1Q8WU10 500 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 FAM222BQ8WU58 562 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 CHPT1Q8WUD6 406 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 RNF133Q8WVZ7 376 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 SORCS1Q8WY21 1168 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 SMARCD2Q92925 531 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 HGDQ93099 445 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 FAM46BQ96A09 425 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 SLCO4A1Q96BD0 722 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 ELMOD3Q96FG2 381 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 MRPL48Q96GC5 212 aaKnown RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 TMEM80Q96HE8 168 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 PPP1R16AQ96I34 528 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 AKR1E2Q96JD6 320 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 LMLNQ96KR4 655 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 LRR1Q96L50 414 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 TGS1Q96RS0 853 aaKnown RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 SLC22A12Q96S37 553 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 DCLRE1CQ96SD1 692 aaKnown RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 PFDN5Q99471 154 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 KLHDC3Q9BQ90 382 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 RTP3Q9BQQ7 232 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 SLC30A2Q9BRI3 323 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 TCEAL7Q9BRU2 100 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 PCGF1Q9BSM1 259 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 DCUN1D5Q9BTE7 237 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 C20orf24Q9BUV8 137 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 SCNM1Q9BWG6 230 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 TSSK1BQ9BXA7 367 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 NUAK2Q9H093 628 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 FZD8Q9H461 694 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 RNF41Q9H4P4 317 aaPredicted RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 GREM2Q9H772 168 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 MTHFD2LQ9H903 347 aaPredicted RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 GPN2Q9H9Y4 310 aaPredicted RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 ZBTB26Q9HCK0 441 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 KCNK9Q9NPC2 374 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 KRCC1Q9NPI7 259 aaPredicted RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 GSN-AS1Q9NRJ2 163 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 LIN7CQ9NUP9 197 aaKnown RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 RNF186Q9NXI6 227 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 PTTG3PQ9NZH4 202 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 DNAJC12Q9UKB3 198 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 GUCA1BQ9UMX6 200 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 NDRG2Q9UN36 371 aaKnown RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 OSGIN2Q9Y236 505 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 KLK4Q9Y5K2 254 aa5.03□□□□□ -1.6
VPS41-209ENST00000457055 COL5A3P25940 1745 aaPredicted RBP5.03□□□□□ -1.6
VPS41-209ENST00000457055 COL4A3Q01955 1670 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 TMEM213A2RRL7 107 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 C5orf60A6NFR6 353 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 FAM171A2A8MVW0 826 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 EVPLLA8MZ36 301 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 H0YGN5 161 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 H3BN98 237 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 RNASET2O00584 256 aaKnown RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 GOSR2O14653 212 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms