RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 CLCA1A8K7I4 914 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 KCNK2O95069 426 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 G6PDP11413 515 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 UQCRC1P31930 480 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 PEX19P40855 299 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 DGKQP52824 942 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 CLDN18P56856 261 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 B3GALT5-AS1P59052 145 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 MYBPHQ13203 477 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 BCL2A1Q16548 175 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 RAET1LQ5VY80 246 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 FIGNL1Q6PIW4 674 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 ARSKQ6UWY0 536 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 ADGRE4PQ86SQ3 457 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 RIMKLAQ8IXN7 391 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 KRTCAP2Q8N6L1 136 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 COX18Q8N8Q8 333 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 FAM110BQ8TC76 370 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 C16orf58Q96GQ5 468 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 PPP1R36Q96LQ0 422 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 ZFP3Q96NJ6 502 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 UCN2Q96RP3 112 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 HHATLQ9HCP6 504 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 ASIC5Q9NY37 505 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 FOXD3Q9UJU5 478 aaPredicted RBP19.22■□□□□ 0.67
HMGB3-205ENST00000455596 L3MBTL1Q9Y468 752 aa19.22■□□□□ 0.67
HMGB3-205ENST00000455596 ABCA12Q86UK0 2595 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 SYT5O00445 386 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 OXSR1O95747 527 aaPredicted RBP19.21■□□□□ 0.67
HMGB3-205ENST00000455596 HMGN2P05204 90 aaKnown RBP19.21■□□□□ 0.67
HMGB3-205ENST00000455596 TMIGD3P0DMS9 266 aaPredicted RBP19.21■□□□□ 0.67
HMGB3-205ENST00000455596 PEPDP12955 493 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 BGNP21810 368 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 LCN1P31025 176 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 OPRM1P35372 400 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 CCT3P49368 545 aaKnown RBP19.21■□□□□ 0.67
HMGB3-205ENST00000455596 RPL14P50914 215 aaKnown RBP19.21■□□□□ 0.67
HMGB3-205ENST00000455596 DIO3P55073 304 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 CLDN8P56748 225 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 KRTAP10-9P60411 292 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 STX3Q13277 289 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 MPP2Q14168 576 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.21■□□□□ 0.67
HMGB3-205ENST00000455596 FBXL19-AS1Q494R0 122 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 APOOLQ6UXV4 268 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 CHMP1BQ7LBR1 199 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 GALNT10Q86SR1 603 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 PSMA8Q8TAA3 256 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 RNASE6Q93091 150 aaKnown RBP19.21■□□□□ 0.67
HMGB3-205ENST00000455596 WNT2BQ93097 391 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 C1GALT1C1Q96EU7 318 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 OTUB1Q96FW1 271 aaPredicted RBP19.21■□□□□ 0.67
HMGB3-205ENST00000455596 CHMP6Q96FZ7 201 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 STACQ99469 402 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 SORT1Q99523 831 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 SH3GL2Q99962 352 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 G6PC3Q9BUM1 346 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 DUSP26Q9BV47 211 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 BHLHE41Q9C0J9 482 aaPredicted RBP19.21■□□□□ 0.67
HMGB3-205ENST00000455596 NEUROD4Q9HD90 331 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 GIN1Q9NXP7 522 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 CLCF1Q9UBD9 225 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 FBN2P35556 2912 aa19.21■□□□□ 0.67
HMGB3-205ENST00000455596 IGLV3-32A0A0A0MS00 114 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 ALG1L2C9J202 215 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 LINC01387J3KSC0 135 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 CFLARO15519 480 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 NDUFB5O43674 189 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 RCBTB2O95199 551 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 C6orf47O95873 294 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 IL18BPO95998 194 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 NGFRP08138 427 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 AGFG1P52594 562 aaKnown RBP19.2■□□□□ 0.66
HMGB3-205ENST00000455596 C21orf58P58505 322 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 POU6F2P78424 691 aaPredicted RBP19.2■□□□□ 0.66
HMGB3-205ENST00000455596 LASP1Q14847 261 aaKnown RBP19.2■□□□□ 0.66
HMGB3-205ENST00000455596 EXOSC6Q5RKV6 272 aaKnown RBP19.2■□□□□ 0.66
HMGB3-205ENST00000455596 CDC73Q6P1J9 531 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 GRAMD2AQ8IUY3 354 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 OR56A1Q8NGH5 318 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 OR4C3Q8NH37 302 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 GOT1L1Q8NHS2 421 aaPredicted RBP19.2■□□□□ 0.66
HMGB3-205ENST00000455596 NUDT8Q8WV74 236 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 PAIP2Q9BPZ3 127 aaKnown RBP19.2■□□□□ 0.66
HMGB3-205ENST00000455596 PIGQQ9BRB3 760 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 BTBD2Q9BX70 525 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 ACBD3Q9H3P7 528 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 PIGUQ9H490 435 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 CXorf36Q9H7Y0 433 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 AKTIPQ9H8T0 292 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 DUSP22Q9NRW4 184 aa19.2■□□□□ 0.66
HMGB3-205ENST00000455596 ERLIN1O75477 346 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 HPGDP15428 266 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 POU3F2P20265 443 aaPredicted RBP19.19■□□□□ 0.66
HMGB3-205ENST00000455596 TBXA2RP21731 343 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 TP53BP2Q13625 1128 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 SPDYE7PQ495Y7 208 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 GLYR1Q49A26 553 aaPredicted RBP19.19■□□□□ 0.66
HMGB3-205ENST00000455596 HHATQ5VTY9 493 aa19.19■□□□□ 0.66
HMGB3-205ENST00000455596 CAMKMTQ7Z624 323 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms