RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 HSPA12AO43301 675 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR10H3O60404 316 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 LDB3O75112 727 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 HRGP04196 525 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 IMPDH1P20839 514 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ACER2Q5QJU3 275 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 OVCH1Q7RTY7 1134 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR4N4Q8N0Y3 316 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 SUMF1Q8NBK3 374 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 NINJ1Q92982 152 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 S100PBPQ96BU1 408 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 NARS2Q96I59 477 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 TMEM121BQ9BXQ6 578 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 PARD6AQ9NPB6 346 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ABCG2Q9UNQ0 655 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 LIPT1Q9Y234 373 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 NOP16Q9Y3C1 178 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 TSPAN11A1L157 253 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF587BE7ETH6 402 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 CYB5BO43169 146 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 SEMA3DO95025 777 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 CR2P20023 1033 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 AQP1P29972 269 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 ST3GAL4Q11206 333 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 DNAL1Q4LDG9 190 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 PRAMEF8Q5VWM4 474 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 PRAMEF7Q5VXH5 474 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 MRGPREQ86SM8 312 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLCO6A1Q86UG4 719 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 NAT8LQ8N9F0 302 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 M1APQ8TC57 530 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 NSMAFQ92636 917 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC47A1Q96FL8 570 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 PAQR5Q9NXK6 330 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 SH3GLB1Q9Y371 365 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 NME7Q9Y5B8 376 aa5.26□□□□□ -1.57
CDC42BPA-209ENST00000448940 GBF1Q92538 1859 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 SCN1AP35498 2009 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 CFAP73A6NFT4 308 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 PRODHO43272 600 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 GJB3O75712 270 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 CELA2BP08218 269 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 FAM98BQ52LJ0 330 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZMAT1Q5H9K5 638 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 LRIF1Q5T3J3 769 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 PRSS42Q7Z5A4 293 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 SATL1Q86VE3 508 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 MMP21Q8N119 569 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 GPR150Q8NGU9 434 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 AP1S3Q96PC3 154 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 REEP1Q9H902 201 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 LIN28AQ9H9Z2 209 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 PTBP2Q9UKA9 531 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 AP4B1Q9Y6B7 739 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 CASC3O15234 703 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 SSX4O60224 188 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 INSM1Q01101 510 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 SQLEQ14534 574 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ASTE1Q2TB18 679 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 C6orf141Q5SZD1 244 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 RHBDD2Q6NTF9 364 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 B3GNT8Q7Z7M8 397 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ANKRD46Q86W74 232 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR5P2Q8WZ92 322 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 NEIL2Q969S2 332 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 MYEOVQ96EZ4 313 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 COL21A1Q96P44 957 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 REEP4Q9H6H4 257 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF346Q9UL40 294 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR51B4Q9Y5P0 310 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 NKX6-3A6NJ46 265 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 PROB1E7EW31 1015 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLCO2B1O94956 709 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 WNT1P04628 370 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 GALNT1Q10472 559 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZSWIM7Q19AV6 140 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 NKAPLQ5M9Q1 402 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 CRIPAKQ8N1N5 446 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 BHLHE22Q8NFJ8 381 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 B3GNT7Q8NFL0 401 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 TMEM158Q8WZ71 300 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 SIGLEC10Q96LC7 697 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 UGT2B28Q9BY64 529 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC35C2Q9NQQ7 365 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ERVK-18Q9QC07 812 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 IGHV5-51A0A0C4DH38 117 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC19A2O60779 497 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 FAM20BO75063 409 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 STX11O75558 287 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 HPP00738 406 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 PRG2P13727 222 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF83P51522 516 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 TCEAL1Q15170 157 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 HFEQ30201 348 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 CLEC6AQ6EIG7 209 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 TRNP1Q6NT89 227 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 PGBD2Q6P3X8 592 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 TTC33Q6PID6 262 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 MRPL21Q7Z2W9 205 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 C10orf107Q8IVU9 208 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms