RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ACKR3P25106 362 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 HLCSP50747 726 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 TPMTP51580 245 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ARSFP54793 590 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 PRPS1P60891 318 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 THEM4Q5T1C6 240 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 LDB1Q86U70 411 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 FBXO16Q8IX29 292 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 NPAS3Q8IXF0 933 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 OR4K14Q8NGD5 310 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 OR5M3Q8NGP4 307 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 OR4A16Q8NH70 328 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ADGRG7Q96K78 797 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ACKR4Q9NPB9 350 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 GPR83Q9NYM4 423 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 OR6C2Q9NZP2 312 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 LGALS13Q9UHV8 139 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 CSTAP01040 98 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 FOLR1P15328 257 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ARSBP15848 533 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ELK1P19419 428 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 HNRNPA2B1P22626 353 aaKnown RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 GPR50Q13585 617 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 KIAA0141Q14154 515 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 TMEM183BQ1AE95 376 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 METAP1DQ6UB28 335 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 OR1S2Q8NGQ3 325 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 DDIT4LQ96D03 193 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 SLC29A1Q99808 456 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 OR10A5Q9H207 317 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 OR10A2Q9H208 303 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 CRLF2Q9HC73 371 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 SACM1LQ9NTJ5 587 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 B4GALT6Q9UBX8 382 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 V9GYS6 101 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 TRAV18A0A075B6X5 111 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 CD8B2A6NJW9 211 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 C11orf98E9PRG8 122 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 SURF4O15260 269 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 SLC37A4O43826 429 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 HPNP05981 417 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 KLK1P06870 262 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 CD8BP10966 210 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ADPRHP54922 357 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 RCAN2Q14206 197 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 TMEM244Q5VVB8 128 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 SLX4IPQ5VYV7 408 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 FBXW12Q6X9E4 464 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 IQCKQ8N0W5 287 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 OR5A2Q8NGI9 324 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 JOSD2Q8TAC2 188 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 FKBPLQ9UIM3 349 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 TLL1O43897 1013 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 PDGFBP01127 241 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 RHBDL3P58872 404 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 PPP1R3AQ16821 1122 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 PIGZQ86VD9 579 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ZNF321PQ8N8H1 164 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 TAAR1Q96RJ0 339 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ARPC5LQ9BPX5 153 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ST6GALNAC5Q9BVH7 336 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 HMX1Q9NP08 348 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 TBX10O75333 385 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 UPK1BO75841 260 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 EOMESO95936 686 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 RAB40ALP0C0E4 278 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 CKMT2P17540 419 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 SPI1P17947 270 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 RAB1AP62820 205 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 WDR5BQ86VZ2 330 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 PPP1R3BQ86XI6 285 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 CCDC116Q8IYX3 515 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 PRR18Q8N4B5 295 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 CD200R1Q8TD46 325 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 RAB40AQ8WXH6 277 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 PIGQQ9BRB3 760 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 EDEM2Q9BV94 578 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 UCK1Q9HA47 277 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 SLAMF7Q9NQ25 335 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ZNF355PQ9NSJ1 428 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ATF5Q9Y2D1 282 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 DERAQ9Y315 318 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 MAP2P11137 1827 aaKnown RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 XRCC3O43542 346 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 NUDT3O95989 172 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 MT-CYBP00156 380 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 TLE6Q9H808 572 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 K7ERU9 68 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 FBXO24O75426 580 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 AADACP22760 399 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 GCGRP47871 477 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 RNF144AP50876 292 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ZNF763Q0D2J5 394 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 SLC14A2Q15849 920 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 C11orf91Q3C1V1 193 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 RPL7L1Q6DKI1 246 aaKnown RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 THOC6Q86W42 341 aaKnown RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 PSMF1Q92530 271 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 YIPF5Q969M3 257 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 CRAMP1Q96RY5 1269 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms