RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SPTAN1Q13813 2472 aaKnown RBP10.87□□□□□ -0.67
RFC4-208ENST00000447345 HEATR5AQ86XA9 2040 aa10.87□□□□□ -0.67
RFC4-208ENST00000447345 COL12A1Q99715 3063 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 CLEC18AA5D8T8 446 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 B4DXG7 233 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 CCL21O00585 134 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 DYNC1I1O14576 645 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 OXSR1O95747 527 aaPredicted RBP10.86□□□□□ -0.67
RFC4-208ENST00000447345 ANGPTL1O95841 491 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 IGHG3P01860 377 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 OR12D1P0DN82 309 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 HPGDP15428 266 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 CAPN3P20807 821 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 LRRC74AQ0VAA2 488 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 RCAN2Q14206 197 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.86□□□□□ -0.67
RFC4-208ENST00000447345 FLYWCH1Q4VC44 716 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 CLEC18BQ6UXF7 455 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 APOOLQ6UXV4 268 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 C16orf62Q7Z3J2 963 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 PLCZ1Q86YW0 608 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 FUNDC1Q8IVP5 155 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 ZNF614Q8N883 585 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 CLEC18CQ8NCF0 446 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 FAM83FQ8NEG4 500 aaPredicted RBP10.86□□□□□ -0.67
RFC4-208ENST00000447345 OR4K17Q8NGC6 315 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 OR4C3Q8NH37 302 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 OR14L1PQ8NHC6 308 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 GOT1L1Q8NHS2 421 aaPredicted RBP10.86□□□□□ -0.67
RFC4-208ENST00000447345 FAM57AQ8TBR7 257 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 FAM110BQ8TC76 370 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 RNF138Q8WVD3 245 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 NTNG2Q96CW9 530 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 SPDL1Q96EA4 605 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 NEURL3Q96EH8 262 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 AURKBQ96GD4 344 aaPredicted RBP10.86□□□□□ -0.67
RFC4-208ENST00000447345 ITCHQ96J02 903 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 DSN1Q9H410 356 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 CCDC134Q9H6E4 229 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 PNPLA3Q9NST1 481 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 QPCTLQ9NXS2 382 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 MED11Q9P086 117 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 TRIM33Q9UPN9 1127 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 ZNF835Q9Y2P0 537 aa10.86□□□□□ -0.67
RFC4-208ENST00000447345 A0A1B0GUH1 482 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 SCDO00767 359 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 AQP7O14520 342 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 ADAM10O14672 748 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 NDUFB5O43674 189 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 HPNP05981 417 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 ESRRAP11474 423 aaPredicted RBP10.85□□□□□ -0.67
RFC4-208ENST00000447345 DCTP40126 519 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 MRPL19P49406 292 aaKnown RBP10.85□□□□□ -0.67
RFC4-208ENST00000447345 ATP4BP51164 291 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 ARFIP2P53365 341 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 GYS2P54840 703 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 GPR68Q15743 365 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 COX20Q5RI15 118 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 ZNF585AQ6P3V2 769 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 BLOC1S3Q6QNY0 202 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 Q6ZPB1 254 aaPredicted RBP10.85□□□□□ -0.67
RFC4-208ENST00000447345 MSANTD1Q6ZTZ1 278 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 HMGN2P46Q86SG4 172 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 DOLPP1Q86YN1 238 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 OR2M3Q8NG83 312 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 NEIL3Q8TAT5 605 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 SSC4DQ8WTU2 575 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 XAGE5Q8WWM1 108 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 STON2Q8WXE9 905 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 SH3YL1Q96HL8 342 aaPredicted RBP10.85□□□□□ -0.67
RFC4-208ENST00000447345 ZNF385DQ9H6B1 395 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 SDHAF3Q9NRP4 125 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 EXD2Q9NVH0 621 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 ALKBH4Q9NXW9 302 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 ACAD8Q9UKU7 415 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 RPH3AQ9Y2J0 694 aaPredicted RBP10.85□□□□□ -0.67
RFC4-208ENST00000447345 PCDHGB3Q9Y5G1 929 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 SPTBN1Q01082 2364 aaKnown RBP10.85□□□□□ -0.67
RFC4-208ENST00000447345 CACNA1CQ13936 2221 aa10.85□□□□□ -0.67
RFC4-208ENST00000447345 ICE1Q9Y2F5 2266 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 DOPEY1Q5JWR5 2465 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 A0A1B0GVC2 190 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 A1L4Q6 167 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 DUXAA6NLW8 204 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 ALG1L2C9J202 215 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 SUSD5O60279 629 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 HCN1O60741 890 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 ZG16O60844 167 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 TNFRSF21O75509 655 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 CBR3O75828 277 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 LDLRP01130 860 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 TBXA2RP21731 343 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 DPP4P27487 766 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 PER3P56645 1201 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 HPCAP84074 193 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 FUT5Q11128 374 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 CD226Q15762 336 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.84□□□□□ -0.676e-6■■■■□ 22.6
RFC4-208ENST00000447345 NDUFAF6Q330K2 333 aa10.84□□□□□ -0.67
RFC4-208ENST00000447345 GPAT3Q53EU6 434 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms