RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 Q6ZSR9 355 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 BTLAQ7Z6A9 289 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 EXOC3L1Q86VI1 746 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 CDRT4Q8N9R6 151 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 NUP43Q8NFH3 380 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 OR2T11Q8NH01 316 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 CLHC1Q8NHS4 586 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 SLC9A6Q92581 669 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 FCRL1Q96LA6 429 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 GATA5Q9BWX5 397 aaPredicted RBP18.96■□□□□ 0.63
VSX1-206ENST00000444511 ZNF175Q9Y473 711 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 TESMINQ9Y4I5 508 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 IGLV3-32A0A0A0MS00 114 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 TBX19O60806 448 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 TRIM13O60858 407 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 NKX2-2O95096 273 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 CD79BP40259 229 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 KIR2DL2P43627 348 aaPredicted RBP18.95■□□□□ 0.62
VSX1-206ENST00000444511 ADAM8P78325 824 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 SLC18A2Q05940 514 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 PON3Q15166 354 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 SGCBQ16585 318 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 RFTN2Q52LD8 501 aaPredicted RBP18.95■□□□□ 0.62
VSX1-206ENST00000444511 ZNF385BQ569K4 471 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 APOOLQ6UXV4 268 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 RNF165Q6ZSG1 346 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 FNDC9Q8TBE3 224 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 ZNF845Q96IR2 970 aaPredicted RBP18.95■□□□□ 0.62
VSX1-206ENST00000444511 MS4A4EQ96PG1 132 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 SLC39A3Q9BRY0 314 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 OPN3Q9H1Y3 402 aaPredicted RBP18.95■□□□□ 0.62
VSX1-206ENST00000444511 TUBB1Q9H4B7 451 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 RNF122Q9H9V4 155 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 HHATLQ9HCP6 504 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 STOML1Q9UBI4 398 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 BAIAP2L1Q9UHR4 511 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 TMED5Q9Y3A6 229 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 AP4B1Q9Y6B7 739 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 MPDZO75970 2070 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 ZFHX3Q15911 3703 aa18.95■□□□□ 0.62
VSX1-206ENST00000444511 EMC8O43402 210 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 KCNJ5P48544 419 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 PCYT1AP49585 367 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 FGFBP1Q14512 234 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 GALNTL6Q49A17 601 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 KANK2Q63ZY3 851 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 GALNT10Q86SR1 603 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 HOMEZQ8IX15 550 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 DDIASQ8IXT1 998 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 FBXO30Q8TB52 745 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 HOXB13Q92826 284 aaPredicted RBP18.94■□□□□ 0.62
VSX1-206ENST00000444511 TRIM44Q96DX7 344 aaPredicted RBP18.94■□□□□ 0.62
VSX1-206ENST00000444511 NEUROD4Q9HD90 331 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 ACSS1Q9NUB1 689 aaPredicted RBP18.94■□□□□ 0.62
VSX1-206ENST00000444511 KLHL28Q9NXS3 571 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 ZNF226Q9NYT6 803 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 VDAC3Q9Y277 283 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 DNAJC15Q9Y5T4 150 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 ABCA4P78363 2273 aa18.94■□□□□ 0.62
VSX1-206ENST00000444511 NF1P21359 2839 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 A0A1W2PPR1 153 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 TLDC2A0PJX2 215 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 SHISA8B8ZZ34 492 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 ALG1L2C9J202 215 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 LSM1O15116 133 aaKnown RBP18.93■□□□□ 0.62
VSX1-206ENST00000444511 NDUFB5O43674 189 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 FCGR2AP12318 317 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 POU2F1P14859 743 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 MAP3K8P41279 467 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 ASMTP46597 345 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 OCRLQ01968 901 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 PDE7AQ13946 482 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 PPP4R4Q6NUP7 873 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 ZNF474Q6S9Z5 364 aaPredicted RBP18.93■□□□□ 0.62
VSX1-206ENST00000444511 MED12LQ86YW9 2145 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 METTL25Q8N6Q8 603 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 OR4C3Q8NH37 302 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 WFIKKN1Q96NZ8 548 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 MED18Q9BUE0 208 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 ELOVL5Q9NYP7 299 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 C6orf203Q9P0P8 240 aaPredicted RBP18.93■□□□□ 0.62
VSX1-206ENST00000444511 NTMQ9P121 344 aa18.93■□□□□ 0.62
VSX1-206ENST00000444511 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 UQCRHLA0A096LP55 91 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 EIF1AYO14602 144 aaKnown RBP18.92■□□□□ 0.62
VSX1-206ENST00000444511 CTIFO43310 598 aaKnown RBP18.92■□□□□ 0.62
VSX1-206ENST00000444511 OXSR1O95747 527 aaPredicted RBP18.92■□□□□ 0.62
VSX1-206ENST00000444511 CD8BP10966 210 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 ACP2P11117 423 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 HPGDP15428 266 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 DDX5P17844 614 aaKnown RBP18.92■□□□□ 0.62
VSX1-206ENST00000444511 CD53P19397 219 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 FRKP42685 505 aaPredicted RBP18.92■□□□□ 0.62
VSX1-206ENST00000444511 TMEM44Q2T9K0 475 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 MFSD12Q6NUT3 480 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 FIGNL1Q6PIW4 674 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 R3HCC1LQ7Z5L2 792 aaKnown RBP18.92■□□□□ 0.62
VSX1-206ENST00000444511 GATSQ8NAP1 163 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 SLC16A11Q8NCK7 471 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 OR6Y1Q8NGX8 325 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms