RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PDZD2O15018 2839 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 B4DXG7 233 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 ITM2AO43736 263 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 ANGPTL1O95841 491 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 ACP2P11117 423 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 PEPDP12955 493 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 HPGDP15428 266 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 ZNF708P17019 499 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 PRPS1L1P21108 318 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 CLDN18P56856 261 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 ABCE1P61221 599 aaKnown RBP18.18■□□□□ 0.5
LRCH3-208ENST00000443727 MLC1Q15049 377 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 PDCD2Q16342 344 aaPredicted RBP18.18■□□□□ 0.5
LRCH3-208ENST00000443727 DUSP5Q16690 384 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 LSM12Q3MHD2 195 aaKnown RBP18.18■□□□□ 0.5
LRCH3-208ENST00000443727 ZCCHC12Q6PEW1 402 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 FIGNL1Q6PIW4 674 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 P4HA3Q7Z4N8 544 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 MEIOBQ8N635 442 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 KRTCAP2Q8N6L1 136 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 NATD1Q8N6N6 113 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 INTS12Q96CB8 462 aaKnown RBP18.18■□□□□ 0.5
LRCH3-208ENST00000443727 FAM120BQ96EK7 910 aaKnown RBP18.18■□□□□ 0.5
LRCH3-208ENST00000443727 GIMAP5Q96F15 307 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 OTUB1Q96FW1 271 aaPredicted RBP18.18■□□□□ 0.5
LRCH3-208ENST00000443727 ZFP3Q96NJ6 502 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 SH3GL2Q99962 352 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 RTN4RQ9BZR6 473 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 ACBD3Q9H3P7 528 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 HHATLQ9HCP6 504 aa18.18■□□□□ 0.5
LRCH3-208ENST00000443727 CFLARO15519 480 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 NDUFB5O43674 189 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 KCNK2O95069 426 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 IL18BPO95998 194 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 MAP3K8P41279 467 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 EEFSECP57772 596 aaKnown RBP18.17■□□□□ 0.5
LRCH3-208ENST00000443727 B3GALT5-AS1P59052 145 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 BCL2A1Q16548 175 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 POMZP3Q6PJE2 187 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 PLXDC2Q6UX71 529 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 ZNF781Q8N8C0 355 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 OR5M1Q8NGP8 315 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 GOT1L1Q8NHS2 421 aaPredicted RBP18.17■□□□□ 0.5
LRCH3-208ENST00000443727 OR5P2Q8WZ92 322 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 HOXB13Q92826 284 aaPredicted RBP18.17■□□□□ 0.5
LRCH3-208ENST00000443727 C1GALT1C1Q96EU7 318 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 ZIM3Q96PE6 472 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 PAIP2Q9BPZ3 127 aaKnown RBP18.17■□□□□ 0.5
LRCH3-208ENST00000443727 PIGQQ9BRB3 760 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 G6PC3Q9BUM1 346 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 SFXN3Q9BWM7 321 aa18.17■□□□□ 0.5
LRCH3-208ENST00000443727 ZNF395Q9H8N7 513 aaPredicted RBP18.17■□□□□ 0.5
LRCH3-208ENST00000443727 SIRT3Q9NTG7 399 aaPredicted RBP18.17■□□□□ 0.5
LRCH3-208ENST00000443727 FAF1Q9UNN5 650 aaPredicted RBP18.17■□□□□ 0.5
LRCH3-208ENST00000443727 LINC01387J3KSC0 135 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 SNUPNO95149 360 aaKnown RBP18.16■□□□□ 0.5
LRCH3-208ENST00000443727 RCBTB2O95199 551 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 C6orf47O95873 294 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 HMGN2P05204 90 aaKnown RBP18.16■□□□□ 0.5
LRCH3-208ENST00000443727 G6PDP11413 515 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 CCT3P49368 545 aaKnown RBP18.16■□□□□ 0.5
LRCH3-208ENST00000443727 DIO3P55073 304 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 EMX2Q04743 252 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 TP53BP2Q13625 1128 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 LASP1Q14847 261 aaKnown RBP18.16■□□□□ 0.5
LRCH3-208ENST00000443727 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.16■□□□□ 0.5
LRCH3-208ENST00000443727 PGS1Q32NB8 556 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 FBXL19-AS1Q494R0 122 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 APOOLQ6UXV4 268 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 KIF18BQ86Y91 864 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 GCNT2Q8N0V5 402 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 OR56A1Q8NGH5 318 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 OR4C3Q8NH37 302 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 UCN2Q96RP3 112 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 BTBD2Q9BX70 525 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 NOP53Q9NZM5 478 aaKnown RBP18.16■□□□□ 0.5
LRCH3-208ENST00000443727 CRIM1Q9NZV1 1036 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 RAP2CQ9Y3L5 183 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 CCDC168Q8NDH2 2452 aa18.16■□□□□ 0.5
LRCH3-208ENST00000443727 SLC22A20A6NK97 555 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 H3BML4 177 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 SCDO00767 359 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 SEC14L5O43304 696 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 OXSR1O95747 527 aaPredicted RBP18.15■□□□□ 0.5
LRCH3-208ENST00000443727 ATP6V1C1P21283 382 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 TBXA2RP21731 343 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 CPA2P48052 419 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 SLC1A6P48664 564 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 RPL14P50914 215 aaKnown RBP18.15■□□□□ 0.5
LRCH3-208ENST00000443727 POU6F2P78424 691 aaPredicted RBP18.15■□□□□ 0.5
LRCH3-208ENST00000443727 FOXF2Q12947 444 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 CCNJQ5T5M9 372 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 HHATQ5VTY9 493 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 ADGRE4PQ86SQ3 457 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 KIRREL3Q8IZU9 778 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 GATSQ8NAP1 163 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 NUDT8Q8WV74 236 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 SMPDL3BQ92485 455 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 COQ8BQ96D53 544 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms