RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SRSF6Q13247 344 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 LINC01555Q8NAE3 123 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR7A2PQ8NGA2 310 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 TAMM41Q96BW9 452 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 SDCCAG3Q96C92 435 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 METTL2AQ96IZ6 378 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 SPATA9Q9BWV2 254 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 WDR12Q9GZL7 423 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 RAB33BQ9H082 229 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 EQTNQ9NQ60 294 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 NDUFAF4Q9P032 175 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 MRTO4Q9UKD2 239 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 CFL2Q9Y281 166 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 LYVE1Q9Y5Y7 322 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 TRBV11-1A0A0K0K1C0 115 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 K7ENP7 123 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TP53I11O14683 189 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 CTSVO60911 334 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZFAND5O76080 213 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 LRATO95237 230 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 CPSF4O95639 269 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TP53P04637 393 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 LCKP06239 509 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 MMP11P24347 488 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TPP2P29144 1249 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF155Q12901 538 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 DSG2Q14126 1118 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 SERTAD2Q14140 314 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TBCEQ15813 527 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF385BQ569K4 471 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 INO80CQ6PI98 192 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TIPARPQ7Z3E1 657 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 SLC46A3Q7Z3Q1 461 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 SAMD14Q8IZD0 417 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 DNAJC22Q8N4W6 341 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TMCO5AQ8N6Q1 288 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 MFSD9Q8NBP5 474 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 GAL3ST3Q96A11 431 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 METTL7AQ9H8H3 244 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 PLA2G3Q9NZ20 509 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 BTNL2Q9UIR0 455 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 ESPL1Q14674 2120 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TRAV17A0A0B4J275 112 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 H0YIV9 168 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 PRB1P04280 392 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TPOP07202 933 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 CERS1P27544 350 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 IL12BP29460 328 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 AHRP35869 848 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TMED10P49755 219 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 EFNB1P98172 346 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 NPRL3Q12980 569 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 CSTF3Q12996 717 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 ITGADQ13349 1161 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TMEM35AQ53FP2 167 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 IL20RBQ6UXL0 311 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 MRGPREQ86SM8 312 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 ANKRD46Q86W74 232 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR2L5Q8NG80 312 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 SLC22A8Q8TCC7 542 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 SMPDL3BQ92485 455 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 LGALS12Q96DT0 336 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 HSH2DQ96JZ2 352 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TSSK3Q96PN8 268 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 THUMPD3Q9BV44 507 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 DGCR6LQ9BY27 220 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 DSN1Q9H410 356 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 ASCL3Q9NQ33 180 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 RLIMQ9NVW2 624 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 KLRF1Q9NZS2 232 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 B4GALT7Q9UBV7 327 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 SAMD4AQ9UPU9 718 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 LY6G6EA0A0G2JKS1 128 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 PYCARD-AS1I3L0S3 204 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 ERVH48-1M5A8F1 160 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 WWP2O00308 870 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 GMFGO60234 142 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TIAF1O95411 115 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 NSA2O95478 260 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 GSNP06396 782 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 NPPBP16860 134 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 ENDOUP21128 410 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 GGT2P36268 569 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 FEN1P39748 380 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 MANFP55145 182 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 EXT1Q16394 746 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 DCAF10Q5QP82 559 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 GFRALQ6UXV0 394 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 GALNT5Q7Z7M9 940 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 LAS2Q8IYD9 372 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 CLECL1Q8IZS7 167 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 CACTIN-AS1Q8N1I8 211 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF555Q8NEP9 628 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR4K14Q8NGD5 310 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR5T3Q8NGG3 340 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 DIO2Q92813 273 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 GGHQ92820 318 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 DHRS1Q96LJ7 313 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 TSPAN10Q9H1Z9 355 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 CDCP1Q9H5V8 836 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms