RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 PCDH10Q9P2E7 1040 aa12.15□□□□□ -0.46
BRPF3-203ENST00000441123 SEMA4FO95754 770 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 IMPA1P29218 277 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 RPS5P46782 204 aaKnown RBP12.15□□□□□ -0.47
BRPF3-203ENST00000441123 S100A10P60903 97 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 REEP5Q00765 189 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 CHAF1BQ13112 559 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 PHF19Q5T6S3 580 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 ADAMTSL4Q6UY14 1074 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 PLXDC1Q8IUK5 500 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 PARP16Q8N5Y8 322 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 HORMAD2Q8N7B1 307 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 C12orf76Q8N812 135 aaPredicted RBP12.15□□□□□ -0.47
BRPF3-203ENST00000441123 OR4K13Q8NH42 304 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 SPRYD4Q8WW59 207 aaPredicted RBP12.15□□□□□ -0.47
BRPF3-203ENST00000441123 LMF2Q9BU23 707 aaKnown RBP12.15□□□□□ -0.47
BRPF3-203ENST00000441123 CNIH4Q9P003 139 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 NLKQ9UBE8 527 aa12.15□□□□□ -0.47
BRPF3-203ENST00000441123 A6NIZ1 184 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 CYP17A1P05093 508 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 GPX2P18283 190 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 CBLP22681 906 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 RAP1BP61224 184 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 RAP1AP62834 184 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 FAM76BQ5HYJ3 339 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 SPATC1Q76KD6 591 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 SLC43A2Q8N370 569 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 OR2A12Q8NGT7 310 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 KCTD12Q96CX2 325 aaKnown RBP12.14□□□□□ -0.47
BRPF3-203ENST00000441123 ANKRD19PQ9H560 264 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 HBQ1P09105 142 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 FURINP09958 794 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 PTNP21246 168 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 RBMS1P29558 406 aaKnown RBP12.14□□□□□ -0.47
BRPF3-203ENST00000441123 TEKQ02763 1124 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 SLC5A12Q1EHB4 618 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 HMGN2P46Q86SG4 172 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 OR8S1Q8NH09 359 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 AIFM2Q9BRQ8 373 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 SRA1Q9HD15 236 aaKnown RBP12.14□□□□□ -0.47
BRPF3-203ENST00000441123 C13orf42A0A1B0GVH6 325 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 GABARAPO95166 117 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 IGLV3-27P01718 113 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 CSF1P09603 554 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 HERV-K104P61576 105 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 PDE7AQ13946 482 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 GRK1Q15835 563 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 OR4N5Q8IXE1 308 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 EGLN2Q96KS0 407 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 C5AR2Q9P296 337 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 CLEC4EQ9ULY5 219 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 A8MU76 341 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 PRAMEF26H0Y7S4 382 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 PLGP00747 810 aaPredicted RBP12.14□□□□□ -0.47
BRPF3-203ENST00000441123 SMIM18P0DKX4 95 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 PDHA2P29803 388 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 TSFMP43897 325 aaKnown RBP12.14□□□□□ -0.47
BRPF3-203ENST00000441123 IRF4Q15306 451 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 CHRFAM7AQ494W8 412 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 SYT6Q5T7P8 510 aaPredicted RBP12.14□□□□□ -0.47
BRPF3-203ENST00000441123 TMEM225Q6GV28 225 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 ULK3Q6PHR2 472 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 TMEM207Q6UWW9 146 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 ARMCX6Q7L4S7 300 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 LRRC28Q86X40 367 aaPredicted RBP12.14□□□□□ -0.47
BRPF3-203ENST00000441123 IQCF2Q8IXL9 164 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 MRPL43Q8N983 215 aaKnown RBP12.14□□□□□ -0.47
BRPF3-203ENST00000441123 GATSQ8NAP1 163 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 FAM174AQ8TBP5 190 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 CREB3L4Q8TEY5 395 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 KATNBL1Q9H079 304 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 TUBB1Q9H4B7 451 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 TREM1Q9NP99 234 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 ABRACLQ9P1F3 81 aa12.14□□□□□ -0.47
BRPF3-203ENST00000441123 VSTM2BA6NLU5 285 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 SCG5P05408 212 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 CHMP24386 653 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 CRABP1P29762 137 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 PRDX1Q06830 199 aaKnown RBP12.13□□□□□ -0.47
BRPF3-203ENST00000441123 ILKQ13418 452 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 KCTD9Q7L273 389 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 NOXA1Q86UR1 476 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 Q8N9G6 341 aaPredicted RBP12.13□□□□□ -0.47
BRPF3-203ENST00000441123 ADAMTS14Q8WXS8 1223 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 NUP50Q9UKX7 468 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 KCNIP3Q9Y2W7 256 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 H3BUI4 141 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 FMO6PO60774 539 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 GABRA5P31644 462 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 ADH7P40394 386 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 NKX3-2P78367 333 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 AGAP6Q5VW22 663 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 CHTF18Q8WVB6 975 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 HHIPL1Q96JK4 782 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 AGAP4Q96P64 663 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 TGM7Q96PF1 710 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 NEDD4LQ96PU5 975 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 PDFQ9HBH1 243 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 SYT5O00445 386 aa12.13□□□□□ -0.47
BRPF3-203ENST00000441123 ADAM12O43184 909 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms